LOCUS BC036653 4270 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens poly(A) polymerase beta (testis specific), mRNA (cDNA
clone MGC:32994 IMAGE:5269035), complete cds.
ACCESSION BC036653
VERSION BC036653.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4270)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4270)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC036653.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37202113.
FEATURES Location/Qualifiers
source 1..4270
/db_xref="H-InvDB:HIT000051752"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32994 IMAGE:5269035"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4270
/gene="PAPOLB"
/gene_synonym="PAPT"
/gene_synonym="TPAP"
/db_xref="GeneID:56903"
/db_xref="HGNC:HGNC:15970"
/db_xref="MIM:607436"
CDS 185..2098
/gene="PAPOLB"
/gene_synonym="PAPT"
/gene_synonym="TPAP"
/codon_start=1
/product="poly(A) polymerase beta (testis specific)"
/protein_id="AAH36653.2"
/db_xref="GeneID:56903"
/db_xref="HGNC:HGNC:15970"
/db_xref="MIM:607436"
/translation="MMPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLI
ETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFG
SYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKL
CFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNI
DNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLV
FSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSIST
RMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQHLEWV
GLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRTMWVIGLGLKKPDNS
EILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAVHLRRKELHQLLPHHVLQDKKA
HSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTSTMKTGPLISSSQGRNSPALAVMTAS
VANIQATEFSLQQVNTNESSGVALNESIPHAVSQPAISPSPKAMVARVVSSTCLISHP
DLQETQQQTYLIL"
BASE COUNT 1303 a 849 c 879 g 1239 t
ORIGIN
1 atgttggggc tgaggggaag gaggagaagc tcctgaagcg gcgggcgcgc agcgggagtg
61 ggagtggggt cggaccaggg cagctagaag ccctgccctt ccgcctcagc ggatcatgac
121 ccgggcggcg gccgcgaagg tcgcggtggt gggggacgtg ccctggcggg gcgggcgctg
181 aaagatgatg ccgtttccgg tgacaaccca gggaccaccg cagccggcgc cgccgccgaa
241 tcgctacggc gtctcctcgc ctatcagtct agcggtcccc aaggagacgg actgcctcct
301 cacccagagg ctaatagaaa ccctcaggcc cttcggggtc ttcgaagagg aagaggaact
361 gcagcgcagg attttagttt tggacaaatt aaataatctg gtaaaggaat ggatacgcga
421 aatcagtgaa agcaagagtc ttccccagtc tgtaattgaa aacgttggag gaaagatttt
481 tacgtttggc tcttacagat taggagtaca tacgaaaggc gcagatattg acgccttgtg
541 cgttgcacca agtcatgtgg atcgaagcga ctttttcacc tcattctatg ctaaactgaa
601 actacaggag gaagtgaaag atttaagggc tgtccaggag gcatttgtgc cagttatcaa
661 actgtgtttt gatgggatag agattgatat tttatttgca agattagcac tacagactat
721 tccagaagat ttggacttaa gagatgacag tctacttaaa aatttagaca ttagatgcat
781 aagaagcctt aatggttgcc gggtaaccga tgaaatttta catctagtgc caaacattga
841 caacttcagg ctgactctga gagccatcaa actgtgggcc aagtgccaca atatctattc
901 caatatatta ggtttcctcg gaggtgtttc ctgggccatg ctagtagcaa gaacttgtca
961 gctttatcca aatgcagtag cgtcaactct tgtacggaaa ttcttcttgg tattttcaga
1021 atgggaatgg ccaaacccag tgttactgaa ggagcctgaa gaacggaatc ttaatttgcc
1081 tgtatgggac ccaagagtaa atcccagtga taggtaccat cttatgccta tcatcacacc
1141 agcataccca cagcagaact ccacatacaa cgtgtctatt tcaaccagga tggtcatgat
1201 tgaggagttt aaacaggggc ttgctatcac acacgagatt ttgctaagta aggcagagtg
1261 gtccaaactc tttgaagctc caagcttctt tcaaaagtac aagcattata ttgtacttct
1321 ggcaagtgca tcaacagaaa aacaacattt agaatgggtg ggcttggtgg aatcaaagat
1381 ccgaatcctg gttgggagct tggagaagaa tgaatttatt acactggcac atgtgaatcc
1441 acagtcattt ccagcaccca aagaaaatcc tgatatggaa gaatttcgta caatgtgggt
1501 gattgggtta gggctaaaaa agccagataa ttctgaaatt ctcagcattg atctcaccta
1561 tgatatccag tctttcacag atactgttta taggcaagca gtgaatagta agatgtttga
1621 gatgggtatg aaaattactg cagtgcattt aagaagaaag gaacttcacc agctgctgcc
1681 tcatcatgtg cttcaggaca agaaagcaca ctcaacagaa ggtagaagat tgacagattt
1741 gaacgacagc agctttgact tgtctgcagg ctgtgaaaac agcatgtctg tgccttcatc
1801 tactagcact atgaagacag gcccattgat tagcagttct cagggtagaa acagtcctgc
1861 cttggctgta atgacagcat ctgtggctaa catacaggct actgaatttt ccttgcaaca
1921 ggtgaatacc aatgaaagtt caggggttgc attaaacgaa agtattcctc acgctgtctc
1981 tcagcctgcc atttctccat caccaaaggc catggtcgcc agagttgttt cttcaacatg
2041 tctcataagc catccagacc ttcaggaaac tcagcaacaa acatatctaa tcctatagtt
2101 ggagtctaga ggatattctt gcctcataaa gaagaaagga ccaagaaaac caaaacggaa
2161 gaggagaaac tcaatacaaa gacaagtaca actccattag aaaaattcag acagcatctt
2221 ctctattggc ctctcaggga acatcagtat agatctttcc ggtatccctg ttctccctgc
2281 aaatccaatt cctgttatca agaattcagt aaaacaggtt gaatggttaa aaacaacctc
2341 aagggtccat gaacaatatc tgccgactga acctgttgtc ttcaaatact aaggaaggag
2401 aatgaggggt acgggactag gtatgacttg aaatagattg aggctcattt ggtaacttcc
2461 ttactgagcc agtcttgatc agaagtccac attagtatgt gacagctaga ggtactgtta
2521 ttaatgtatc agcaacagtt acattaacta tttcaaagga ctactgccct taaaatgaaa
2581 aaacctttca gctatgtttg tacccgtgac tgacatctgg actggattta tgcttgatgc
2641 attgttggga aaatatgcaa tacaaactgg tatcagaatt ccttatactg atgaggcact
2701 ttatattttt tattagagag tagaactaat tttagatttt tcaaattggt gaattttatt
2761 tttccctgaa gaggtttctt cactattaat cttaaaattg gataccattg tgcagcggtg
2821 tactgtactt cagagaaagc ataaaagtac atctagctca gtccctatga ggtagctgta
2881 accctttaaa atgaaatgtc aactttaagg tatgtttttg acatcaacca ttagtaggtc
2941 tttggttttg atggcacact atggagaaag gacacactgg ttttaatctg tagaactgtt
3001 ttagagtaat tagcaatcaa acattttctt tgagctatca aagctccata ttctcttgtc
3061 ctcaatcatt agtcctaaaa caaaaaagct ttttgcctcc ctctcttctc tttgcctgta
3121 tgcacacagt atgcttatgt gtcatttcac aagaaaaaag gaataatatt ctctaaacca
3181 tgatgtgaaa ctgacaatcc tgtggccaca tggcacaaaa caccaaatat tggttatgat
3241 gaaacaccac attttagcaa aactttacta aatgtaatgt ctatgagata tgtttctgat
3301 cttggatgac catttgatca ctgcatatga gaagttttgt tcattccaca gaatacctcc
3361 ttataggaaa gttaatttcc aattgcacac ataagcaaaa aggcattttc ttcaagaatt
3421 ttaaacactt ttatttttaa acgatttatc aaaattcatc tctaaatttt acatgtagaa
3481 acataaaaaa gtaatttcta gcaagcactt gacatcttac tggctttctg ctcttttagt
3541 ctacaaaaga tcagcaatac tttaagttaa aaaaaatctc ataattaagc agtagagcat
3601 ctatgattag gaaatgtgag gggcaacaga tgtgaatgaa tgaaagttga gtctttctta
3661 atctagacag caaacttaac aggctttcca attagccttg ctttaacccc tcccgtccct
3721 cctctaactc tgcacttttc atgttaaact gcaattactt aaactctttt cctgtcctgc
3781 attaattttc caaagttgga atatagtcat gtccttttat gctgtagaga cttttctttc
3841 accattactt tctgatatct agtacacagt atttcttttt ctcacatctt tgccgtttca
3901 ccacaataat aaatcgggtg aagtgtgcac aatatctgta ttttgaatgg ctatggcgtt
3961 aggttgaaat ggccaggcac aaatttagtc tggtcatttt gtttacacat tgggaaaaaa
4021 attagtttat taaacattac ctgtaactgt gtctgtttta ccaagctgga accttgggac
4081 tttttatttc taatttttat tacctgaatg tcagaccatt ttttcatgtg atgtacctag
4141 tgagtggagt ttgctttgtt ttatggtatc tgtactcctg gtatattcaa gcactgtttt
4201 gaaaacagat gacttatttc tccattaaaa atgcaataaa aataaatggc aaacaaaaaa
4261 aaaaaaaaaa
//