LOCUS BC036068 2894 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens chloride channel 4, mRNA (cDNA clone MGC:33700 IMAGE:5311366), complete cds. ACCESSION BC036068 VERSION BC036068.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2894) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2894) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: p Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 11641404. FEATURES Location/Qualifiers source 1..2894 /db_xref="H-InvDB:HIT000094242" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33700 IMAGE:5311366" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2894 /gene="CLCN4" /gene_synonym="ClC-4" /gene_synonym="ClC-4A" /gene_synonym="CLC4" /db_xref="GeneID:1183" /db_xref="HGNC:HGNC:2022" /db_xref="MIM:302910" CDS 51..2333 /gene="CLCN4" /gene_synonym="ClC-4" /gene_synonym="ClC-4A" /gene_synonym="CLC4" /codon_start=1 /product="chloride channel 4" /protein_id="AAH36068.1" /db_xref="GeneID:1183" /db_xref="HGNC:HGNC:2022" /db_xref="MIM:302910" /translation="MVNAGAMSGSGNLMDFLDEPFPDVGTYEDFHTIDWLREKSRDTD RHRKITSKSKESIWEFIKSLLDAWSGWVVMLLIGLLAGTLAGVIDLAVDWMTDLKEGV CLSAFWYSHEQCCWTSNETTFEDRDKCPLWQKWSELLVNQSEGASAYILNYLMYILWA LLFAFLAVSLVRVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLLIKTVTLVLVVSYG LSLGKEGPLVHVACCCGNFFSSLFSKYSKNEGKRREVLSAAAAAGVSVAFGAPIGGVL FSLEEVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEYHTPWYMAELFP FILLGVFGGLWGTLFIRCNIAWCRRRKTTRLGKYPVLEVIVVTAITAIIAYPNPYTRQ STSELISELFNDCGALESSQLCDYINDPNMTRPVDDIPDRPAGVGVYTAMWQLALALI FKIVVTIFTFGMKIPSGLFIPSMAVGAIAGRMVGIGVEQLAYHHHDWIIFRNWCRPGA DCVTPGLYAMVGAAACLGGVTRMTVSLVVIMFELTGGLEYIVPLMAAAVTSKWVADAF GKEGIYEAHIHLNGYPFLDVKDEFTHRTLATDVMRPRRGEPPLSVLTQDSMTVEDVET LIKETDYNGFPVVVSRDSERLIGFAQRRELILAIKNARQRQEGIVSNSIMYFTEEPPE LPANSPHPLKLRRILNLSPFTVTDHTPMETVVDIFRKLGLRQCLVTRSGRLLGIITKK DVLRHMAQMANQDPESIMFN" BASE COUNT 686 a 693 c 821 g 694 t ORIGIN 1 gttcaggtgg gcggccgcgg gcgcgatgcg gcactgcagg tgtaattagc atggtcaatg 61 cgggagcgat gagtggctct ggaaacctga tggatttcct cgatgagccg ttccctgatg 121 tggggacgta tgaggacttc cacaccatcg actggctaag ggaaaagtca cgggacaccg 181 acagacacag gaagatcacc agcaagagca aggagtccat atgggagttc atcaagagcc 241 tgctggatgc ctggtcggga tgggtggtga tgctgctcat cggcctgctg gcgggcacct 301 tggctggggt catcgatctc gccgtggact ggatgacgga cctgaaggag ggggtctgcc 361 tgtctgcctt ctggtatagc catgagcagt gttgctggac ttctaacgag accacttttg 421 aggacagaga caagtgtccc ctgtggcaga aatggtcgga gctgctggtg aatcagtcag 481 agggtgccag tgcttacatt ctgaattact taatgtacat cctatgggcg ctgctgtttg 541 catttttggc tgtctccctg gtgcgtgtat ttgcaccata tgcctgtggc tctggcatac 601 cagagataaa gaccattttg agcggcttta tcatcagggg ctacttgggg aagtggaccc 661 tgctaatcaa gacagtcacg ctggtgctgg tagtgtccta cggtctgagc cttgggaagg 721 aagggccgct agtgcacgtg gcttgttgct gtggcaactt cttcagcagc cttttctcca 781 agtacagcaa gaatgagggc aagaggcggg aggtgctttc agctgcagcg gctgctggag 841 tctctgttgc ctttggtgca ccaattggag gcgtgctttt cagtctagaa gaggtcagtt 901 actactttcc cctgaagacc ttgtggaggt catttttcgc agccctggtg gcggccttta 961 cgctgagatc catcaatccc tttgggaata gccgtctcgt tctcttttat gtggaatacc 1021 acacgccctg gtacatggct gaactcttcc ccttcatcct gcttggggtc ttcgggggct 1081 tgtggggaac cctcttcatc cgctgcaaca tcgcctggtg caggaggcgc aagaccacca 1141 ggctggggaa gtacccggtg ctggaggtca ttgtggtgac tgccatcact gccatcattg 1201 cctaccccaa tccctacaca cgccagagca ccagcgagct catttctgag ctgttcaatg 1261 actgtggagc ccttgagtct tcccagctct gtgactacat caatgacccc aacatgactc 1321 ggcctgtgga tgacattcca gaccggccgg ctggtgtcgg tgtttacacg gccatgtggc 1381 agctggccct ggcactgatc ttcaaaatcg tcgttaccat atttaccttt ggcatgaaga 1441 tcccgtcggg cctcttcatc cccagcatgg ctgtgggcgc gatagcgggc aggatggtgg 1501 gaattggcgt ggagcagctg gcctaccatc accatgactg gatcatcttc aggaactggt 1561 gcagacccgg tgcagactgt gtcacgccag ggctgtacgc aatggtggga gctgcggcct 1621 gcctcggtgg agttaccagg atgacggtgt cattggtggt catcatgttt gaattaaccg 1681 ggggtctgga gtacatcgtg cccctgatgg cggcggctgt gaccagcaag tgggtagctg 1741 atgcatttgg gaaagaaggc atctacgagg cccacatcca cttaaatggg taccctttcc 1801 ttgacgtgaa ggacgagttt actcaccgca cactggccac cgacgtcatg cggccccggc 1861 ggggagagcc gccactgtcg gtgctcaccc aggacagcat gactgtcgag gacgtggaga 1921 cgctcatcaa ggagaccgac tacaacggct tccccgtggt ggtctccaga gactccgagc 1981 gcctcattgg atttgcccag aggagggaac tgattctcgc aataaagaac gccagacaga 2041 ggcaggaggg cattgtgagc aattccatca tgtacttcac ggaggaaccc cccgagctgc 2101 cggccaacag cccacatccc ctgaagctgc ggcgcatcct gaacctcagc ccgtttacag 2161 tgacagacca cactccgatg gaaacggtgg tggatatctt ccggaaactg gggcttcggc 2221 agtgcctggt gacgcggagc gggagacttc ttggcatcat cacaaaaaag gatgttctga 2281 gacatatggc ccagatggca aaccaggacc ccgaatccat catgtttaat tagcaacaag 2341 gtggcaatta ttttcagaaa aacactgact gtgtcattta aaaagaaata aatgatatgt 2401 tattatccca atgaaagatc atgcattggg gacagcagaa acaaaagctt ttttggaaag 2461 gcggggaaga aggatgaaac ctttaaaaac aaaaacaaaa acatcaatga gtaggcattt 2521 tatagcttta accccgtatg agtttcaagc tgtgtttcct aatgagtttg ctactgctgt 2581 gggggcatgt gggtgggtaa atgatgtaaa tgatgtgatc tgtacaagta tgtggagcat 2641 gaatgctgac tcaagaaact tttactcctt ctgctcaagg ctgatgtttg taacttatga 2701 acacacgtga agtgttgagt ccaaaagaca aaggggcatc ggcatgtcag cgtccttatt 2761 tattggttct tgaagttttg ctgctatgtt actgaatcat actaaagaca tttgcgctta 2821 ctttgttgaa aaagaaaaag aaattaaatt tgaacacagt gaaagctgca agtatgccaa 2881 aaaaaaaaaa aaaa //