LOCUS BC035761 4027 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens SEC24 family, member D (S. cerevisiae), mRNA (cDNA clone MGC:46092 IMAGE:5554774), complete cds. ACCESSION BC035761 VERSION BC035761.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4027) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4027) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 79 Row: b Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7662658. FEATURES Location/Qualifiers source 1..4027 /db_xref="H-InvDB:HIT000051503" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:46092 IMAGE:5554774" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4027 /gene="SEC24D" /db_xref="GeneID:9871" /db_xref="HGNC:HGNC:10706" /db_xref="MIM:607186" CDS 220..3321 /gene="SEC24D" /codon_start=1 /product="SEC24 family, member D (S. cerevisiae)" /protein_id="AAH35761.1" /db_xref="GeneID:9871" /db_xref="HGNC:HGNC:10706" /db_xref="MIM:607186" /translation="MSQQGYVATPPYSQPQPGIGLSPPHYGHYGDPSHTASPTGMMKP AGPLGATATRGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQP SAQSSYPGPISTSSVTQLGSQLSAMQINSYGSGMAPPSQGPPGPLSATSLQTPPRPPQ PSILQPGSQVLPPPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPPLPGQTLGA GYPPQQAANSGPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQVIENDR ASRGGQVYATNTRGQIPPLVTTDCMIQDQGNASPRFIRCTTYCFPCTSDMAKQAQIPL AAVIKPFATIPSNESPLYLVNHGESGPVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCV NDVPPFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSKPPNPPAFIFMIDVS YSNIKNGLVKLICEELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQ MMVVTDVGEVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGM EALKAADCPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYDSLAK DCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDI EKKIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSE DSGALIQCAVLYTTISGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAV LHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVL LSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKSTMLPAAVRCSESRL SEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLR MIMGIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSYVDFLCCVHKEICQ LLN" BASE COUNT 1109 a 974 c 852 g 1092 t ORIGIN 1 ccacgcgtcc gagcccagct gcaactccga gcgtgagtcc aggctaaggg gacgccggcc 61 ggggaagagg cgcggcggga gaagcgaccg cagcgggagc ccggccaccg agggctgccg 121 gcactaggcg cagagccgcc agcgctcgga agcccgcggg gtgcgggagc gggaacagac 181 ttcttttgta gaattatcct atggaatgat attttcataa tgagtcaaca aggttacgtg 241 gctacacctc cgtattctca gcctcagcct ggaataggcc tttctccacc tcattatggg 301 cactatgggg atccgtcgca cacagcatct ccaacaggta tgatgaagcc agcagggcct 361 ttgggggcca ccgccactag gggaatgttg cctccgggtc ccccacctcc tggaccccat 421 cagtttggtc agaatggagc tcatgccact ggtcaccctc cccaaagatt tccaggccct 481 ccacctgtca acaatgtggc atcctcacat gcaccatacc aaccctctgc acaatcttct 541 tatccaggtc ctatatccac ttcatctgtc acccagctgg gcagccagct cagtgctatg 601 caaatcaaca gctatggttc aggcatggct cctccaagcc agggaccccc tggccctctg 661 tcagccacat cattgcagac tcctccacga cctccacagc cttccatttt gcagcctgga 721 tctcaagttc ttccaccacc acccaccaca ctcaatggtc ctggtgcctc acctttgcct 781 ctaccaatgt acagaccaga tgggctctct gggcctcctc ctccaaatgc ccagtaccag 841 cccccacctc ttccaggcca gaccttgggt gctggatatc ctccgcagca ggcagccaac 901 tctggtcccc agatggcagg cgcacaactg tcttacccag gaggcttccc tggaggtcct 961 gcacagatgg ctggtccgcc acagccccag aagaagctgg atcctgactc tatccctagc 1021 ccaatccagg tgattgagaa tgatagagcc agcagaggag gacaagttta tgccaccaac 1081 accagaggcc agatccctcc cctggtcact acagattgca tgatacaaga ccaaggaaat 1141 gccagtcctc gattcatccg ttgtacaaca tactgttttc catgcacgtc agatatggct 1201 aagcaagctc agattccatt agctgctgtc atcaagccct ttgccaccat tccttcaaat 1261 gagagtcccc tttacttggt aaatcacggc gagagtggac cagtcagatg caacaggtgc 1321 aaggcctaca tgtgcccatt tatgcagttc atcgaaggag gaaggagata tcagtgtgga 1381 ttttgcaact gtgtgaatga tgttccacca ttctatttcc aacatctgga ccacattgga 1441 agaagactgg accactatga gaaaccagag ttatctctag gatcttatga atatgttgcc 1501 actttggatt attgcagaaa gagtaagcct cccaacccac cagcctttat cttcatgatt 1561 gatgtttcat atagtaacat aaagaatgga cttgtcaagc tcatatgtga agaactgaag 1621 accatgctgg aaaaaattcc aaaggaagag caagaagaga cgtctgcaat tcgagtgggt 1681 tttatcacat ataacaaagt tctccatttc tttaatgtga agagtaatct ggcccagcct 1741 cagatgatgg tggtgactga tgttggagaa gtctttgttc ctttgttgga tggtttcctt 1801 gtcaactatc aagaatccca atctgtgatt cataatttgt tggaccagat tccagacatg 1861 tttgcagact ctaatgaaaa tgagactgtc tttgctcctg tcatccaggc tggcatggaa 1921 gcactaaagg cagcagactg tcctgggaag ctgttcatct tccattcttc cttgccaact 1981 gctgaagcac cagggaagct caaaaacaga gatgacaaaa aactggttaa tacagacaaa 2041 gagaagatac ttttccagcc ccaaacaaat gtctatgact cattggccaa ggactgcgtg 2101 gctcacggct gctctgtgac actcttcctc tttcctagtc agtatgtgga cgtggcctcg 2161 ctggggctgg ttcctcagct cactggagga accctttaca aatacaacaa tttccagatg 2221 cacttggata gacaacaatt tttgaacgac ctcagaaatg atattgaaaa gaaaataggc 2281 tttgatgcta ttatgagggt tcgtaccagc acaggtttca gagccactga tttctttggt 2341 ggaatcttga tgaacaacac caccgatgta gaaatggctg ccatcgattg tgacaaggca 2401 gtgaccgtgg agttcaagca cgatgacaaa ctcagtgaag acagtggagc cttaatccag 2461 tgtgctgtgc tttacacgac aatcagtggt caaagaagac ttcggattca caatcttggc 2521 ttaaactgca gctctcagct agctgatctt tataagagct gtgagacaga tgctcttatc 2581 aacttctttg ccaagtcagc ttttaaagca gttcttcacc agcctttgaa ggtcatccgg 2641 gaaattctag ttaatcagac tgcccatatg ttggcatgtt accggaagaa ttgtgcaagt 2701 ccttctgcag caagccagct tattctacca gattccatga aagtattgcc agtgtacatg 2761 aattgcttgt tgaaaaactg tgtactactc agcagaccag agatctcaac tgatgaacga 2821 gcataccaga gacagctggt catgaccatg ggtgtggctg actctcagct tttcttctac 2881 ccacaacttc tgcccataca cacgttagat gtcaagagta caatgttacc tgctgccgtt 2941 cgttgctctg agtcccgtct ttcagaagaa ggaatattct tactggctaa tggtctacac 3001 atgttcctgt ggttgggagt aagcagccca ccagaactga tccaaggaat atttaatgtg 3061 ccatcttttg cacatatcaa cacagatatg acattgctgc ctgaagtggg aaacccatac 3121 tctcaacaac tcagaatgat aatgggtatt atccaacaaa agaggccata ttcaatgaag 3181 ctcacaattg taaagcagcg agaacaacca gaaatggttt tccgacagtt cctggtagaa 3241 gacaaaggac tttacggagg ctcttcttat gtggatttcc tttgttgtgt tcacaaggag 3301 atctgtcagc tgcttaatta attgaaactt ctctgtcatt gatgttgcat ttccaaggag 3361 ataatctcct tcttggtgcc taattttcta gatgataata ggctagtttt gatttcttgc 3421 tcattttcag aataactttc caggaagaga tggcatttag aacttcagct ttggtgctca 3481 ggtataaagc caattaaggt acaattgtac cataaaggga acaatctgtt tctgattgca 3541 cagtttctaa tttttaaaac tgatgtggtt tgcatttcat aaaaggcaaa gtttacagaa 3601 ccataaacat tctcaatttt ctttatgcta gacatataaa ttatttttca aactgtatag 3661 atttggggta aaaagttgtc tcagttcctc tcccaattgc aatgagaaaa aaaagcttaa 3721 tttttacatt atacttaatt ttctaaaacc atgtaactcc attgaacaca tttttcaact 3781 taaggtctgc atagcagact tttaataacc ttgggattta tctggtagaa caatatgtgt 3841 tctacatttt tttcataatt atatattgtg tatgttaaaa ctattttcca gttgttttgt 3901 ctgtaaaact gtctttatca atatgcttaa tggttctttg tacaattttg aaagtttcta 3961 cctgtatata atggatgtta accagtatca ataaatcact tcgtataatc ttaaaaaaaa 4021 aaaaaaa //