LOCUS BC035761 4027 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens SEC24 family, member D (S. cerevisiae), mRNA (cDNA
clone MGC:46092 IMAGE:5554774), complete cds.
ACCESSION BC035761
VERSION BC035761.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4027)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4027)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: b Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7662658.
FEATURES Location/Qualifiers
source 1..4027
/db_xref="H-InvDB:HIT000051503"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46092 IMAGE:5554774"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4027
/gene="SEC24D"
/db_xref="GeneID:9871"
/db_xref="HGNC:HGNC:10706"
/db_xref="MIM:607186"
CDS 220..3321
/gene="SEC24D"
/codon_start=1
/product="SEC24 family, member D (S. cerevisiae)"
/protein_id="AAH35761.1"
/db_xref="GeneID:9871"
/db_xref="HGNC:HGNC:10706"
/db_xref="MIM:607186"
/translation="MSQQGYVATPPYSQPQPGIGLSPPHYGHYGDPSHTASPTGMMKP
AGPLGATATRGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQP
SAQSSYPGPISTSSVTQLGSQLSAMQINSYGSGMAPPSQGPPGPLSATSLQTPPRPPQ
PSILQPGSQVLPPPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPPLPGQTLGA
GYPPQQAANSGPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQVIENDR
ASRGGQVYATNTRGQIPPLVTTDCMIQDQGNASPRFIRCTTYCFPCTSDMAKQAQIPL
AAVIKPFATIPSNESPLYLVNHGESGPVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCV
NDVPPFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSKPPNPPAFIFMIDVS
YSNIKNGLVKLICEELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQ
MMVVTDVGEVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGM
EALKAADCPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYDSLAK
DCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDI
EKKIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSE
DSGALIQCAVLYTTISGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAV
LHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVL
LSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKSTMLPAAVRCSESRL
SEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLR
MIMGIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSYVDFLCCVHKEICQ
LLN"
BASE COUNT 1109 a 974 c 852 g 1092 t
ORIGIN
1 ccacgcgtcc gagcccagct gcaactccga gcgtgagtcc aggctaaggg gacgccggcc
61 ggggaagagg cgcggcggga gaagcgaccg cagcgggagc ccggccaccg agggctgccg
121 gcactaggcg cagagccgcc agcgctcgga agcccgcggg gtgcgggagc gggaacagac
181 ttcttttgta gaattatcct atggaatgat attttcataa tgagtcaaca aggttacgtg
241 gctacacctc cgtattctca gcctcagcct ggaataggcc tttctccacc tcattatggg
301 cactatgggg atccgtcgca cacagcatct ccaacaggta tgatgaagcc agcagggcct
361 ttgggggcca ccgccactag gggaatgttg cctccgggtc ccccacctcc tggaccccat
421 cagtttggtc agaatggagc tcatgccact ggtcaccctc cccaaagatt tccaggccct
481 ccacctgtca acaatgtggc atcctcacat gcaccatacc aaccctctgc acaatcttct
541 tatccaggtc ctatatccac ttcatctgtc acccagctgg gcagccagct cagtgctatg
601 caaatcaaca gctatggttc aggcatggct cctccaagcc agggaccccc tggccctctg
661 tcagccacat cattgcagac tcctccacga cctccacagc cttccatttt gcagcctgga
721 tctcaagttc ttccaccacc acccaccaca ctcaatggtc ctggtgcctc acctttgcct
781 ctaccaatgt acagaccaga tgggctctct gggcctcctc ctccaaatgc ccagtaccag
841 cccccacctc ttccaggcca gaccttgggt gctggatatc ctccgcagca ggcagccaac
901 tctggtcccc agatggcagg cgcacaactg tcttacccag gaggcttccc tggaggtcct
961 gcacagatgg ctggtccgcc acagccccag aagaagctgg atcctgactc tatccctagc
1021 ccaatccagg tgattgagaa tgatagagcc agcagaggag gacaagttta tgccaccaac
1081 accagaggcc agatccctcc cctggtcact acagattgca tgatacaaga ccaaggaaat
1141 gccagtcctc gattcatccg ttgtacaaca tactgttttc catgcacgtc agatatggct
1201 aagcaagctc agattccatt agctgctgtc atcaagccct ttgccaccat tccttcaaat
1261 gagagtcccc tttacttggt aaatcacggc gagagtggac cagtcagatg caacaggtgc
1321 aaggcctaca tgtgcccatt tatgcagttc atcgaaggag gaaggagata tcagtgtgga
1381 ttttgcaact gtgtgaatga tgttccacca ttctatttcc aacatctgga ccacattgga
1441 agaagactgg accactatga gaaaccagag ttatctctag gatcttatga atatgttgcc
1501 actttggatt attgcagaaa gagtaagcct cccaacccac cagcctttat cttcatgatt
1561 gatgtttcat atagtaacat aaagaatgga cttgtcaagc tcatatgtga agaactgaag
1621 accatgctgg aaaaaattcc aaaggaagag caagaagaga cgtctgcaat tcgagtgggt
1681 tttatcacat ataacaaagt tctccatttc tttaatgtga agagtaatct ggcccagcct
1741 cagatgatgg tggtgactga tgttggagaa gtctttgttc ctttgttgga tggtttcctt
1801 gtcaactatc aagaatccca atctgtgatt cataatttgt tggaccagat tccagacatg
1861 tttgcagact ctaatgaaaa tgagactgtc tttgctcctg tcatccaggc tggcatggaa
1921 gcactaaagg cagcagactg tcctgggaag ctgttcatct tccattcttc cttgccaact
1981 gctgaagcac cagggaagct caaaaacaga gatgacaaaa aactggttaa tacagacaaa
2041 gagaagatac ttttccagcc ccaaacaaat gtctatgact cattggccaa ggactgcgtg
2101 gctcacggct gctctgtgac actcttcctc tttcctagtc agtatgtgga cgtggcctcg
2161 ctggggctgg ttcctcagct cactggagga accctttaca aatacaacaa tttccagatg
2221 cacttggata gacaacaatt tttgaacgac ctcagaaatg atattgaaaa gaaaataggc
2281 tttgatgcta ttatgagggt tcgtaccagc acaggtttca gagccactga tttctttggt
2341 ggaatcttga tgaacaacac caccgatgta gaaatggctg ccatcgattg tgacaaggca
2401 gtgaccgtgg agttcaagca cgatgacaaa ctcagtgaag acagtggagc cttaatccag
2461 tgtgctgtgc tttacacgac aatcagtggt caaagaagac ttcggattca caatcttggc
2521 ttaaactgca gctctcagct agctgatctt tataagagct gtgagacaga tgctcttatc
2581 aacttctttg ccaagtcagc ttttaaagca gttcttcacc agcctttgaa ggtcatccgg
2641 gaaattctag ttaatcagac tgcccatatg ttggcatgtt accggaagaa ttgtgcaagt
2701 ccttctgcag caagccagct tattctacca gattccatga aagtattgcc agtgtacatg
2761 aattgcttgt tgaaaaactg tgtactactc agcagaccag agatctcaac tgatgaacga
2821 gcataccaga gacagctggt catgaccatg ggtgtggctg actctcagct tttcttctac
2881 ccacaacttc tgcccataca cacgttagat gtcaagagta caatgttacc tgctgccgtt
2941 cgttgctctg agtcccgtct ttcagaagaa ggaatattct tactggctaa tggtctacac
3001 atgttcctgt ggttgggagt aagcagccca ccagaactga tccaaggaat atttaatgtg
3061 ccatcttttg cacatatcaa cacagatatg acattgctgc ctgaagtggg aaacccatac
3121 tctcaacaac tcagaatgat aatgggtatt atccaacaaa agaggccata ttcaatgaag
3181 ctcacaattg taaagcagcg agaacaacca gaaatggttt tccgacagtt cctggtagaa
3241 gacaaaggac tttacggagg ctcttcttat gtggatttcc tttgttgtgt tcacaaggag
3301 atctgtcagc tgcttaatta attgaaactt ctctgtcatt gatgttgcat ttccaaggag
3361 ataatctcct tcttggtgcc taattttcta gatgataata ggctagtttt gatttcttgc
3421 tcattttcag aataactttc caggaagaga tggcatttag aacttcagct ttggtgctca
3481 ggtataaagc caattaaggt acaattgtac cataaaggga acaatctgtt tctgattgca
3541 cagtttctaa tttttaaaac tgatgtggtt tgcatttcat aaaaggcaaa gtttacagaa
3601 ccataaacat tctcaatttt ctttatgcta gacatataaa ttatttttca aactgtatag
3661 atttggggta aaaagttgtc tcagttcctc tcccaattgc aatgagaaaa aaaagcttaa
3721 tttttacatt atacttaatt ttctaaaacc atgtaactcc attgaacaca tttttcaact
3781 taaggtctgc atagcagact tttaataacc ttgggattta tctggtagaa caatatgtgt
3841 tctacatttt tttcataatt atatattgtg tatgttaaaa ctattttcca gttgttttgt
3901 ctgtaaaact gtctttatca atatgcttaa tggttctttg tacaattttg aaagtttcta
3961 cctgtatata atggatgtta accagtatca ataaatcact tcgtataatc ttaaaaaaaa
4021 aaaaaaa
//