LOCUS BC035356 1932 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens allantoicase, mRNA (cDNA clone IMAGE:5170650), complete cds. ACCESSION BC035356 VERSION BC035356.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1932) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1932) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 51 Row: e Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40548424 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1932 /db_xref="H-InvDB:HIT000093843" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5170650" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1932 /gene="ALLC" /gene_synonym="ALC" /db_xref="GeneID:55821" /db_xref="HGNC:HGNC:17377" CDS 1273..1761 /gene="ALLC" /gene_synonym="ALC" /codon_start=1 /product="allantoicase" /protein_id="AAH35356.1" /db_xref="GeneID:55821" /db_xref="HGNC:HGNC:17377" /translation="MADGWETARRLDRPPILENDENGILLVPGCEWAVFRLAHPGVIT RIEIDTKYFEGNAPDSCKVDGCILTTQEEEAVIRQKWILPAHKWKPLLPVTKLSPNQS HLFDSLTLELQDVITHARLTIVPDGGVSRLRLRGFPSSICLLRPREKPMLKFSVSFKA NP" BASE COUNT 599 a 364 c 448 g 521 t ORIGIN 1 gtgatattac tctcataacc cggctcctgc tgaatgactc cctctaggat attttctagg 61 gttttatgcc aatgaagttt ttggttttat ttgttgtaaa tagcaagact tccattgttt 121 taccaaaaaa ttttcagatc actcattttc actaaatttg taaaataaaa acatataggg 181 catgttttag tacaatattt tgattaaatt aattttctat attaaaaatg cttggtttcc 241 accttctagc aattaatatt cgaagaaaca aaacattcgt tctactagaa tcagatgctg 301 tgagttgatt ttggtagcta tttgctgctc tgcagaccta atttcaggct gctgtggttc 361 tcagcagcaa tttgattttg tgaatattat cttttgtatt ctgaatcaca ttgctaagca 421 gggtggtgtt gtaaaaataa aaacataagg ttctcttgtc tgagtctgtg tgggagtcag 481 cgatgcttat ttctagcacg aaacattatc tgtatggtga atttcccgaa tgctgtttga 541 ccttggagtt gttcatttaa tgaaaaaaac ttcaatgcct actatgtgcc cagacctctt 601 ctaggtagag acgatacaag agtggtacag aagtgaacaa cacaggtaag tggtctggcc 661 tacaaggatt tcgcattctg ggtattggag actgatttta gcaggaactt aaaaagataa 721 tttcaggctg tgattagagc tctggagtaa ataacaaaga gatatgataa aatgtaacct 781 ggggagtcag gcagtggctg aatggaggag ggaggagaca acttcagagc atgagaggga 841 agacttttct gaggccatgc ctttaaggtg aggaacataa gtaatctttt ggagagctgg 901 gaaagttgtt ctggtacagg gtaatatcaa gtgcaaaggc cctggggcag tgggcttgtt 961 gtatttgaga aacagcaggt gggtgtggcc aaagcctacc aagagatgac actggagaag 1021 acaggagggt cctgtagtgt atgatacaca agcagccatt tttacaaaca ataactaagg 1081 cacctttcct tttcagatgg tggaattgca cgacttagag tattcggtac tggacaaaaa 1141 gactggactg caactgaccc caaagaacct gcagacctag tggccatcgc ttttgggggt 1201 gtctgtgtag gatttagtaa tgctaagttt gggcacccaa acaatataat aggagttggc 1261 ggggcaaagt ctatggcgga tggttgggaa actgcaagaa ggctggaccg gccaccaata 1321 ttagaaaatg atgagaatgg cattctcttg gttccgggtt gtgaatgggc agttttccga 1381 ttggcacatc ctggagtaat aactcgaatt gaaattgaca caaaatattt tgaaggcaat 1441 gctcctgaca gctgtaaagt ggatgggtgc atcctgacaa ctcaggaaga agaagccgtg 1501 atcaggcaaa agtggattct cccggcccac aagtggaaac cactgcttcc agtgaccaag 1561 ttgtctccca accaaagtca tctgttcgat agcctgaccc tagagctcca agatgtcatc 1621 actcacgcca ggctcaccat cgtccccgac gggggagtga gccgccttcg gctccggggc 1681 ttccccagct ccatctgcct cctgaggccc cgggagaagc ccatgttgaa gttctcggtg 1741 agcttcaaag caaaccctta acacacacaa agccccggtg tcggacacac agcagtaatt 1801 tcccagtcat agtcttcttt tcaaatgttt tgaacacctg gtgatttaat aaagtggtcg 1861 tctcacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1921 aaaaaaaaaa aa //