LOCUS BC035356 1932 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens allantoicase, mRNA (cDNA clone IMAGE:5170650),
complete cds.
ACCESSION BC035356
VERSION BC035356.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1932)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1932)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: e Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548424
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1932
/db_xref="H-InvDB:HIT000093843"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5170650"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1932
/gene="ALLC"
/gene_synonym="ALC"
/db_xref="GeneID:55821"
/db_xref="HGNC:HGNC:17377"
CDS 1273..1761
/gene="ALLC"
/gene_synonym="ALC"
/codon_start=1
/product="allantoicase"
/protein_id="AAH35356.1"
/db_xref="GeneID:55821"
/db_xref="HGNC:HGNC:17377"
/translation="MADGWETARRLDRPPILENDENGILLVPGCEWAVFRLAHPGVIT
RIEIDTKYFEGNAPDSCKVDGCILTTQEEEAVIRQKWILPAHKWKPLLPVTKLSPNQS
HLFDSLTLELQDVITHARLTIVPDGGVSRLRLRGFPSSICLLRPREKPMLKFSVSFKA
NP"
BASE COUNT 599 a 364 c 448 g 521 t
ORIGIN
1 gtgatattac tctcataacc cggctcctgc tgaatgactc cctctaggat attttctagg
61 gttttatgcc aatgaagttt ttggttttat ttgttgtaaa tagcaagact tccattgttt
121 taccaaaaaa ttttcagatc actcattttc actaaatttg taaaataaaa acatataggg
181 catgttttag tacaatattt tgattaaatt aattttctat attaaaaatg cttggtttcc
241 accttctagc aattaatatt cgaagaaaca aaacattcgt tctactagaa tcagatgctg
301 tgagttgatt ttggtagcta tttgctgctc tgcagaccta atttcaggct gctgtggttc
361 tcagcagcaa tttgattttg tgaatattat cttttgtatt ctgaatcaca ttgctaagca
421 gggtggtgtt gtaaaaataa aaacataagg ttctcttgtc tgagtctgtg tgggagtcag
481 cgatgcttat ttctagcacg aaacattatc tgtatggtga atttcccgaa tgctgtttga
541 ccttggagtt gttcatttaa tgaaaaaaac ttcaatgcct actatgtgcc cagacctctt
601 ctaggtagag acgatacaag agtggtacag aagtgaacaa cacaggtaag tggtctggcc
661 tacaaggatt tcgcattctg ggtattggag actgatttta gcaggaactt aaaaagataa
721 tttcaggctg tgattagagc tctggagtaa ataacaaaga gatatgataa aatgtaacct
781 ggggagtcag gcagtggctg aatggaggag ggaggagaca acttcagagc atgagaggga
841 agacttttct gaggccatgc ctttaaggtg aggaacataa gtaatctttt ggagagctgg
901 gaaagttgtt ctggtacagg gtaatatcaa gtgcaaaggc cctggggcag tgggcttgtt
961 gtatttgaga aacagcaggt gggtgtggcc aaagcctacc aagagatgac actggagaag
1021 acaggagggt cctgtagtgt atgatacaca agcagccatt tttacaaaca ataactaagg
1081 cacctttcct tttcagatgg tggaattgca cgacttagag tattcggtac tggacaaaaa
1141 gactggactg caactgaccc caaagaacct gcagacctag tggccatcgc ttttgggggt
1201 gtctgtgtag gatttagtaa tgctaagttt gggcacccaa acaatataat aggagttggc
1261 ggggcaaagt ctatggcgga tggttgggaa actgcaagaa ggctggaccg gccaccaata
1321 ttagaaaatg atgagaatgg cattctcttg gttccgggtt gtgaatgggc agttttccga
1381 ttggcacatc ctggagtaat aactcgaatt gaaattgaca caaaatattt tgaaggcaat
1441 gctcctgaca gctgtaaagt ggatgggtgc atcctgacaa ctcaggaaga agaagccgtg
1501 atcaggcaaa agtggattct cccggcccac aagtggaaac cactgcttcc agtgaccaag
1561 ttgtctccca accaaagtca tctgttcgat agcctgaccc tagagctcca agatgtcatc
1621 actcacgcca ggctcaccat cgtccccgac gggggagtga gccgccttcg gctccggggc
1681 ttccccagct ccatctgcct cctgaggccc cgggagaagc ccatgttgaa gttctcggtg
1741 agcttcaaag caaaccctta acacacacaa agccccggtg tcggacacac agcagtaatt
1801 tcccagtcat agtcttcttt tcaaatgttt tgaacacctg gtgatttaat aaagtggtcg
1861 tctcacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aa
//