LOCUS BC034946 4866 bp mRNA linear HUM 19-OCT-2006 DEFINITION Homo sapiens SEC31 homolog B (S. cerevisiae), mRNA (cDNA clone IMAGE:4826447), complete cds. ACCESSION BC034946 VERSION BC034946.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4866) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4866) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: o Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38149909 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..4866 /db_xref="H-InvDB:HIT000093614" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4826447" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4866 /gene="SEC31B" /gene_synonym="DKFZP434M183" /gene_synonym="SEC31B-1" /db_xref="GeneID:25956" /db_xref="HGNC:HGNC:23197" /db_xref="MIM:610258" CDS 71..1117 /gene="SEC31B" /gene_synonym="DKFZP434M183" /gene_synonym="SEC31B-1" /codon_start=1 /product="SEC31B protein" /protein_id="AAH34946.1" /db_xref="GeneID:25956" /db_xref="HGNC:HGNC:23197" /db_xref="MIM:610258" /translation="MKLKELERPAVQAWSPASQYPLYLATGTSAQQLDSSFSTNGTLE IFEVDFRDPSLDLKHRGVLSALSRFHKLVWGSFGSGLLESSGVIAGGGDNGMLILYNV THILSSGKEPVIAQKQKHTGAVRALDFNPFQGNLLASGASDSEIFIWDLNNLNVPMTL GSKSQPPEDIKALSWNRQAQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGL AWHPDIATQLVLCSEDDRLPVIQLWDLRFASSPLKVLESHSRGILSVSWSQADAELLL TSAKDSQILCRNLGSSEVVYKLPTQSSWCFDVQWCPRDPSVFSAASFNGWISLYAVMG RSWEVQHMRQADKV" BASE COUNT 1104 a 1289 c 1294 g 1179 t ORIGIN 1 agcgggccag aggagcggct ccggccgccg cgcctgaccc ttgtccgggg tcttccgcac 61 aggatagacc atgaagctga aggaacttga gcggccagct gtccaggcat ggagcccagc 121 cagccaatac cctttgtatc tggccacagg aacatctgcc caacagctag attcctcctt 181 cagcacaaat ggcacattgg aaatatttga ggttgatttc agggaccctt ctctggactt 241 gaaacacaga ggagtccttt ctgccttgag caggtttcac aagctggtct gggggagctt 301 tggcagtggg cttctggaaa gctccggggt tattgctggc ggcggggaca atggcatgct 361 tattctatac aatgtgaccc acatcctgtc ttcggggaag gagcctgtga ttgctcagaa 421 acagaagcac acgggggctg tcagagccct cgactttaat cctttccagg gcaacctcct 481 ggcttcaggg gccagcgatt ctgaaatctt catttgggat ctgaataact tgaatgtgcc 541 aatgaccctg ggatccaagt cacagcctcc agaggacatc aaggcactgt cttggaaccg 601 gcaagcccaa cacattctgt cttctgctca ccccagtggc aaggcagttg tgtgggatct 661 caggaagaat gaacctatca tcaaagtcag tgatcacagc aacaggatgc actgctcagg 721 cctggcctgg catcctgaca tagccaccca gttagtgctg tgctcagagg atgatcgact 781 tcccgtgatt cagctgtggg acttgcgctt tgcctcctcg cccttgaagg tgctggagag 841 ccacagcagg gggatcttgt cagtgtcatg gagccaggct gatgctgagc tgctgctcac 901 tagtgctaag gacagccaga tcttgtgccg gaacctgggg agcagtgagg tggtatataa 961 gctaccaaca cagagcagct ggtgctttga tgtgcagtgg tgccctcggg acccttcagt 1021 gttctctgct gcctccttca acggctggat cagtttgtac gctgtgatgg gtaggagctg 1081 ggaagtccag cacatgagac aggctgacaa ggtttgaagg gcttggtaga gaatgctgga 1141 gggaaggggc tgtctctgtt tgtgggagag agacatatgg cttgagaagc ggagatattg 1201 gagattggga gaccagggcc cggggtttgg gagggctgca cctttgccct agtgcccatc 1261 ttcctgaaag gatgttagtt tctgccacaa tgtgaagaag gccttcacct tgactcttgt 1321 tattggatgg gccctgtagt atttcaggga ccgtgggacc cctttgctgg gacagttatt 1381 tcaagagtat gactcttatc tttctctctt ctatagatcc attttgtgcc acactccatt 1441 gtagactttg aatgtagtat ttccaagagc ctacttgcat gggagtccca ccctcgctac 1501 cactcacttc cccatcccct ggaatatggg agtctgacct ttctaggtca aattgggtgt 1561 ctcaaggatt cctcccaaaa tggagtttgt aggtggagtt cctgactaaa ctgccacttt 1621 aggatggcga tgcaggtgtc ttttcccccc agatctcctc ttccttcagc aaaggccagc 1681 ctctcccacc actgcaggtg ccagagcaag tggcacaagc atcactgata cctcccctga 1741 aaaaaccccc caaatggatt agaagaccaa caggtgtttc atttgctttt ggagggaagc 1801 tggttacttt tggcctcccc agcacccctg cccatctggt gccacagcct tgcccccgcc 1861 tagtcttcat cagtcaagtc accacagaat ctgaattcct gatgcgatca gctgagctgc 1921 aggaggcctt gggatcagga aatctactga attactgtca gaacaagagc cagcaagctt 1981 tactgcaaag tgaaaagatg ctgtggcagt tcctgaagcc cgccagagac agctcaggtg 2041 caaggagatg agactataca tcaggcaggt gaccttagag caagactcca gaatgaaatt 2101 cctaaagctt ttaggataca gtaaagatga gcttcagaag aaggtggcca catggttgaa 2161 gagtgacatg gggctaggtg agagtcctca gcccaaggga aatgacctca acagtgacag 2221 acaacaggcc ttctgcagcc aggcctccaa acacaccaca aaggaagcct ctgcttcctc 2281 agccttcttt gatgagctgg tccctcagaa catgactcct tgggagatcc ccatcacaaa 2341 agatattgat ggactcctaa gccaggctct cctgcttggg gaactgggtc cggccgtgga 2401 gctgtgtctg aaggaggagc gctttgctga tgccattatc ctggcccagg ctgggggtac 2461 agatctgctg aagcaaacac aggagcgcta cttggccaag aagaaaacca aaatctcctc 2521 gcttctagcc tgtgttgtgc aaaagaattg gaaggatgtg gtgtgtacct gtagcctgaa 2581 gaactggaga gaggcactgg ctttgctact gacatactca ggcacagaga aatttcccga 2641 gctctgtgac atgctgggaa ctcgcatgga acaggagggc agcagggcac taacctccga 2701 agccagactc tgttatgtgt gctcagggag tgtggagcgg ctggtggagt gctgggcaaa 2761 atgccaccag gctttgtccc ccatggctct gcaggacctg atggagaagg tgatggttct 2821 taacaggagc ttggagcaac tgcggggtcc tcatggggtg agcccaggcc ctgccacaac 2881 ctacagggtc actcagtatg ccaacctcct ggcagcccag ggcagcctgg ccactgccat 2941 gagctttcta cccagggact gtgctcagcc accagttcag cagctaagag atcggctttt 3001 tcatgctcaa ggttctgctg tcttgggcca acagtctccc cctttcccct tcccccggat 3061 tgttgtggga gctaccctcc actctaaaga gacatcatct tacagattgg gatcccagcc 3121 ttctcaccag gtcccaactc catctccaag gccaagggtt ttcacccctc agtcatcacc 3181 agcgatgccc ttggcacctt cccatcctag cccttatcag ggtcccagga cacagaatat 3241 aagtgactac agggcacctg ggcccccagg ccatccagcc tttgcctttg agccctgggg 3301 taaggcctgg acctcaagat tcctggaaag aagccccagc ccccagggga aacctccaga 3361 ggaacaagct gccagagaca tttatgcccc cagcaccaat tactgctcca gttatgagcc 3421 tcacccctga gctacaaggg attcttccct cacagccccc tgtctccagt gtgagtcatg 3481 ctcccccagg agttccagga gaactcagcc tgcagcttca gcacctgcca cctgagaaga 3541 tggaaaggaa ggagctgccc ccagagcatc agtccttgaa gagcagcttt gaggcgcttc 3601 tccaacgctg ctccctgtct gcaactgact taacaaaaag gaagctggaa gaggcagccc 3661 agcgtctgga gtatctatat gagaagctct gtgaggggac actctcacct catgtcgtgg 3721 ctgggctgca tgaggttgcc cgatgtgtgg atgcaggaag ctttgagcag ggccttgcag 3781 tgcatgccca ggtggcgggc tgtagcagct tcagcgaggt gtccagcttc atgcctatcc 3841 tgaagtctgt cctcatcatc gctcataagc tgctggtcta aaccaggcag cctctcttgc 3901 taggaggcca cttctgctgt tacataactc ctccctgcag aagaggggac ttctgcaaca 3961 gattctgttt ctttttcccg actcttttcc ttgctgccag gtatgtgatg ctgtaggctt 4021 ggctccaaac cggctgagtg cctgcttttt actcctttat gtctggcctt ctaggatctg 4081 tccaagacac tctcaggcct ggaggcaggg catagaatca gttcttcact ctccctaata 4141 ctacactctg taaggacctg gggcaggata tcttctcccc cagggatctt ctatttaagt 4201 ggcttctgag agggtgaaca ggattgttac ttttaagcct acctctgctg tgacccatca 4261 tgtgggtctt ttgtttctcc cttctgtggt ttatgagcct gcccttacct tttccctgcc 4321 tctgacttgg tatttccagg tccgtatttc tctgtagccc agggtctggg gtagagctga 4381 ctgctgttca ccctttgaac aactcatgga cgtgagggat gggtgctgag cagaaccaag 4441 agaggaaact ttggcgctgt taaaatggaa tttctcatct gccggcatta ttaagggtgg 4501 gctaggttgg atggaaggtg aaagggatga actgcctttt gctggaagct gtcttaggct 4561 gtgagacagg agcaggggaa ccacagccta tggggaactg cccttgactc cacctatgtt 4621 ggagccttag cccaaggcca ttccttctgt gatgataaag cccagttctg gaattggagc 4681 catattaagg aatgattctc ttccagcgct gctcctcaag ggttgggggt ccttctccct 4741 cgcagccacc acatgtctca gggctacctt ctccgattgg atttgcattt gtggcactgt 4801 ctttgatgca gtgatgtact taatggtgca ataaagctgc ttcgatttgg aaaaaaaaaa 4861 aaaaaa //