LOCUS BC033905 3487 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 7, mRNA (cDNA clone MGC:33815 IMAGE:5262912), complete cds. ACCESSION BC033905 VERSION BC033905.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3487) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3487) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: g Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22027527. FEATURES Location/Qualifiers source 1..3487 /db_xref="H-InvDB:HIT000259069" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33815 IMAGE:5262912" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3487 /gene="ARHGEF7" /gene_synonym="BETA-PIX" /gene_synonym="COOL1" /gene_synonym="DKFZp761K1021" /gene_synonym="KIAA0142" /gene_synonym="P50" /gene_synonym="P50BP" /gene_synonym="P85" /gene_synonym="P85COOL1" /gene_synonym="P85SPR" /gene_synonym="PAK3" /gene_synonym="PIXB" /db_xref="GeneID:8874" /db_xref="MIM:605477" CDS 106..2367 /gene="ARHGEF7" /gene_synonym="BETA-PIX" /gene_synonym="COOL1" /gene_synonym="DKFZp761K1021" /gene_synonym="KIAA0142" /gene_synonym="P50" /gene_synonym="P50BP" /gene_synonym="P85" /gene_synonym="P85COOL1" /gene_synonym="P85SPR" /gene_synonym="PAK3" /gene_synonym="PIXB" /codon_start=1 /product="ARHGEF7 protein" /protein_id="AAH33905.1" /db_xref="GeneID:8874" /db_xref="MIM:605477" /translation="MNSAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRL LERLLPGTIEKTFDANDLYQGQNFNKVLSSLVTLNKVTADIGLGSDSVCARPSSHRIK SFDSLGSQSLHTRTSKLFQGQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKGDV IHVTRVEEGGWWEGTLNGRTGWFPSNYVREVKASEKPVSPKSGTLKSPPKGFDTTAIN KSYYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANISYLMGNLEEICSFQ QMLVQSLEECTKLPEAKQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHSEELGE FMETKGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFK NLSAQCQEVRKRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERY LLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSVIERILV SCNNQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPVTPSSKHADSKPAPL TPAYHTLPHPSHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLS KSPKTMKKLLPKRKPERKPSDEEFASRKSTAALEEDAQILKVIEAYCTSAKTRQTLNS TWQGTDLLHNHVLADDDQPSLDSLGRRSSLSRLEPSDLSEDSDYDSIWTAHSYRMGST SRKSCCSYISHQN" BASE COUNT 918 a 885 c 851 g 833 t ORIGIN 1 agcgggtggg cgaggcggcg gcggcggcgg cgggggccgc gggccgggcc gcagctccga 61 ggtgaaggcg cgcgcccctc cccgcctgcc tcccgggccg cagcgatgaa ttccgccgag 121 caaaccgtta cgtggctcat cactctgggg gtgctggagt cgcccaaaaa aaccatctcg 181 gacccggagg gctttctgca ggcgtcgctg aaggatgggg tggtcctctg caggctgctg 241 gagcgcctgc tccccgggac catcgagaaa acgtttgatg caaatgattt gtatcagggg 301 cagaatttta acaaggtcct cagttcctta gtgactctaa ataaagtaac agcagacatc 361 gggctgggga gtgactccgt gtgtgcccgg ccctcgtctc accgcataaa gtcttttgac 421 tcccttggat cacagtcttt gcacactcgg acttcaaaac tgttccaggg ccagtatcgg 481 agtttggaca tgaccgataa tagcaacaat caactggtag taagagcaaa gtttaacttc 541 cagcagacca atgaggacga gctttccttc tcaaaaggag acgtcatcca tgtcacccgt 601 gtggaagagg gaggctggtg ggagggcaca ctcaacggcc ggaccggctg gttccccagc 661 aactacgtgc gcgaggtcaa ggccagcgag aagcctgtgt ctcccaaatc aggaacactg 721 aagagccctc ccaaaggatt tgatacgact gccataaaca aaagctatta caatgtggtg 781 ctacagaata ttttagaaac agaaaatgaa tattctaaag aacttcagac tgtgctttca 841 acgtacctac ggccattgca gaccagtgag aagttaagtt cagcaaacat ttcatattta 901 atgggaaatc tagaagaaat atgttctttc cagcaaatgc tcgtacagtc tttagaagaa 961 tgcaccaagt tgcccgaagc taagcagaga gtcggaggct gctttttaaa cctgatgcca 1021 cagatgaaaa ccctgtacct cacgtattgt gccaatcacc cttctgcagt gaatgtcctc 1081 acggaacaca gtgaggagtt gggggagttc atggagacca aaggtgccag cagccctggg 1141 attctcgtgc tgaccacggg cctgagcaaa cccttcatgc gcctggataa ataccctacg 1201 ctgctcaaag agctcgagag acacatggag gattatcata cagatagaca agatattcaa 1261 aaatccatgg ctgccttcaa aaacctttca gcccaatgtc aagaagtccg gaagaggaaa 1321 gagcttgagc tgcagatcct gacggaagcc atccggaact gggagggcga tgacattaaa 1381 actctgggca acgtcactta catgtcccag gtcctgattc agtgtgccgg aagtgaggaa 1441 aagaatgaaa gatatcttct actcttccca aatgttttgc taatgttgtc tgccagtcct 1501 aggatgagtg gctttatcta tcagggaaag cttccaacga caggaatgac aatcacaaag 1561 cttgaggaca gtgaaaatca tagaaatgca tttgaaatat cagggagcgt gattgagcgg 1621 atattagtgt cgtgcaacaa ccagcaggat ctgcaggaat gggtggagca cctacagaag 1681 caaacgaagg tcacgtctgt gggaaacccc accataaagc ctcattcagt gccatctcat 1741 accctcccct cccacccggt cactccgtcc agcaagcacg cagacagcaa gcccgcgccg 1801 ctgacgcccg cctaccacac gctgccccac ccctcccacc acggcacccc gcacaccacc 1861 atcaactggg gacccctgga gcctccgaaa acacccaagc cctggagcct gagctgcctg 1921 cggcccgcgc ctcccctccg gccctcagct gctctctgct acaaggagga tcttagtaag 1981 agccctaaga ccatgaaaaa gctgctgccc aagcgcaaac ctgaacggaa gccttcagat 2041 gaggagttcg cgtcccggaa aagcacagct gctttggaag aagatgctca gattctgaaa 2101 gtcattgaag cttactgcac cagcgccaaa acaaggcaaa cactcaattc aacatggcaa 2161 ggcactgacc tgttgcataa tcacgtcttg gctgatgatg accaaccaag cctagactcc 2221 ctggggcgtc gcagtagcct ttctcgtttg gagccttcag acctctcgga agactctgac 2281 tatgacagta tatggacagc ccatagttac agaatgggtt ctacatctcg taagagctgt 2341 tgctcatata tctctcacca gaactaatgc acttctgagc ttttcttaac aaatgcttgt 2401 tgtatcgcag cctgcttttc ttagatgttt tcttgctgtt ccttgtctct tttatgtgat 2461 attttaacaa cttttgagag tgttcctgat atttcccatt gtactttgtg taggcttaac 2521 tgccgatgcg agtatacatt cgaatgactg actattggag ggaggtggtg tgttcacgtg 2581 agcctacatc cgagggtgct cttcgtaagg ggtagttgtt gttttatagc tccaaatggt 2641 ttttttattc tcagtgtagc aactgtttga tttctttctg gatacagctg tatgaacact 2701 tttctatttt atactgaaat cacacaggtt tgtgatctaa gtgccagaac catggaggag 2761 actctggcct tatctgtagg gacctaaatt ttttaagtgc tatgaacact gatcaagtag 2821 ttgtggagag atgagaagaa tatatgcagc aaaggtgctg tgagcccagt tccaacggct 2881 gtgttctggt aatcgtgcag aacagcatgt gggctctggg ccttggcagg tgcacagacg 2941 ggcgggcgtc acgtgtgttc agagcttgtc tccacctcac ggctctgtgc tcttctgtgt 3001 gctgcgttgt ggccgtgaag tgggagctct cctttccaaa ggcagagctt actgtcatgg 3061 ctcagatgtt cactcgcatc ttcaccccaa acttccctga attgcagtga tttctgttat 3121 aaggcacata gcaagcctgt accactctac agtaaaatct ctaccctaac agtttaaagc 3181 ccgaaagctg aagcattcag cctctgcaag tgtagactac tggactgtag tagaggcatt 3241 tggaatactt acaaagtcaa gtgctgtggc ttcagttccc ccggctcccc acccctgaca 3301 tccatactta tgttgtctgg aagagccatg gacacatcat tattttcagc aaccagctgc 3361 agtgaaactc catttacagc aaccccatag tataaaacca caatgcctca ttgtaatggg 3421 atattgaagt tcattgaaga attactaggt tgccatgtgg ctcacttatt taaaaaaaaa 3481 aaaaaaa //