LOCUS BC033887 3359 bp mRNA linear HUM 17-NOV-2006 DEFINITION Homo sapiens KRR1, small subunit (SSU) processome component, homolog (yeast), mRNA (cDNA clone MGC:33073 IMAGE:5268517), complete cds. ACCESSION BC033887 VERSION BC033887.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3359) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3359) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC033887.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: n Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37059784. FEATURES Location/Qualifiers source 1..3359 /db_xref="H-InvDB:HIT000042016" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33073 IMAGE:5268517" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3359 /gene="KRR1" /gene_synonym="RIP-1" /db_xref="GeneID:11103" /db_xref="HGNC:HGNC:5176" CDS 16..1161 /gene="KRR1" /gene_synonym="RIP-1" /codon_start=1 /product="KRR1, small subunit (SSU) processome component, homolog (yeast)" /protein_id="AAH33887.1" /db_xref="GeneID:11103" /db_xref="HGNC:HGNC:5176" /translation="MASPSLERPEKGAGKSEFRNQKPKPENQDESELLTVPDGWKEPA FSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVC TTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKR RQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYN IKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPGS QIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPIVKPKE ASTEAKIDVASIKEKVKKAKNKKLGALTAEEIALKMEADEKKKKKKK" BASE COUNT 1176 a 530 c 638 g 1015 t ORIGIN 1 ggaagcagct tgcaaatggc gtctccctcg ctggagcggc cagaaaaagg cgctggaaaa 61 agtgaatttc gtaaccagaa gccgaagccg gagaaccaag atgaatcaga actccttacg 121 gttcctgatg gttggaagga accagctttt tccaaagagg acaatcccag aggacttttg 181 gaggagagca gtttcgcaac tttgttccca aaatacaggg aagcttactt gaaagagtgt 241 tggccattgg tgcagaaagc cttaaatgaa catcatgtta atgcaaccct ggacctgatc 301 gaaggcagca tgactgtttg tactacaaag aagacttttg atccatatat catcattagg 361 gccagagatc tgataaaact gttagcaagg agtgtttcat ttgaacaggc agtacgaatt 421 cttcaggatg atgttgcatg tgacatcatt aaaataggtt ctttagtaag gaataaagag 481 agatttgtaa aacgaagaca acggcttatt ggtcccaaag gatctacatt gaaggcattg 541 gaactcttaa ctaattgtta cattatggtt cagggaaaca cagtttcagc cattggacct 601 tttagtggct taaaagaggt tagaaaagta gtccttgata ctatgaagaa tattcatcca 661 atttataaca ttaaaagctt aatgattaag agagagttgg caaaagattc tgaattacga 721 tcacaaagtt gggagagatt tttgccacag ttcaagcaca aaaatgtgaa taaacgcaag 781 gaaccaaaga aaaaaactgt taagaaagaa tatacgccat tcccaccacc acaaccagga 841 agtcagatcg ataaagaatt ggctagtggt gaatactttt tgaaggcaaa tcagaagaag 901 cggcagaaaa tggaagcaat aaaggctaaa caagcagaag ccatcagtaa gagacaagag 961 gaaagaaaca aagcatttat tccacctaag gaaaaaccaa ttgtgaaacc taaggaagct 1021 tctactgaag ctaaaattga tgtggccagc atcaaggaaa aggttaagaa agcaaagaat 1081 aagaaactgg gagctcttac agctgaagaa attgcactta agatggaggc agatgaaaag 1141 aaaaagaaga aaaaaaagta acatacccaa aactccttga ctagaactat ctccttttgt 1201 aaaggatttt gagatatcag gcattagttg ccttatttgt gagaaatttt ctgagggctt 1261 tttttttttt tggtggtggt ggttgttcat agaagagtgt tctttataaa ttatattatt 1321 attgtatttt ttgaaaaatt tatactagaa agtggtatat atgtctttgt atacattacg 1381 accattgtga ttatccatta aatccagtgt ctgatgctat tggttagtaa tgatgtccca 1441 gcatttgatg ttccctctct aatgataaca agtaaatatt taggtttatc ccttttgaaa 1501 gtttggtttt acttttaaca gtccatgaac agaaaattaa ggcctctaaa atcagatccc 1561 ctagttactc ctctgttctg aatctgggga agtagtaaac caaaaagaca gggaaaacca 1621 gatatttaga gtcgaagcag catgcaaaaa ataataatgt ttttaactaa tgaaggctac 1681 tggagttact aagaatcacc taaaaatgtg ctactgtacc ttgctcattt tgcagattta 1741 gaagctgaaa catgggttag gttacttact aaaagtccac ctgtggcaac ctgcaaataa 1801 tgcttattta tactaaagat gagtttatct gatagagtta ggaaatttct tcttttgagt 1861 aagagtattg ctataacata tatttttttc tgaaatgttt taaaatagaa gtacacctaa 1921 ttgttattgg ttaaaaagaa agccatatgt gaatgaggtt ggtttttggg ttttttcttt 1981 cctgaattgt attagtccaa aagaactaaa ttagggtact tgtgctgtac caaaatggta 2041 attataacag acagtattag aattactgaa ttaacaatga gaaagagaga agtgtatctg 2101 ttacgtggat atatgggcca gcctggatat acaacagagt agtaacctgt gaaacaaaca 2161 tagaatatcc tcttagacat tgttcctcat aatgcactga cagaattcac atagctctta 2221 atgaaacaat ttaagattga tgtacgtacg tttgacttgg tctcgctgtc ggttaactgt 2281 aaagttaggg ggaagaaaga aaaaaaatta aaagggtaga cacagttgag agttttattt 2341 taaaaagcta agtcttataa ttatgaccat taacttgctt tggctttatt gcagtgactt 2401 tccaagttta attattcaaa actttttgaa ctgactgaat taacttggta tttttaagtt 2461 gactttttac ataaacttta taaacctttt ataaaaagga aactatacca ttactataaa 2521 tggaaaatca ttttacacat catacctagc aggtaataaa atttaaaaaa taaaaattaa 2581 atattagaat gtgagaaatt tattaaaata tagttctaaa aataagtttc ttcctgagaa 2641 gaatgatact gtttatgatg aatccatagt gaaaagacag tgacctctct ttcatccagt 2701 ctagtatatc actaaatcat cattacgatg tttggctatc aagtcattaa ttactgtcct 2761 cctttcactg agctttattc aaattttgac aatcagagca ctgggaagaa ataaattcca 2821 caactgcctt tagccttctg gatactttct tttataaaat agaaaccttt tccacaccag 2881 ttctgcagca gtcgctatta gatgctcgtg gtagaaccca tcaatcatct ggtcctctgg 2941 gtactggtga gcatccctgg tcttcatacc tgtgagtggg ctttgtggtg aattactgta 3001 aatatgctac cctcactttt cttggcagtt atgtccatga aatcaagagt gtgatgttct 3061 agttattttt ttttatatat atttttaaat gttcaatatt caactattga aacaaatgta 3121 catctgtgaa ctagctaaaa tcatcttatg taccactaat atgcccagca cattttgtaa 3181 aacagtcctg atttggcctc caagggtatt tattgaacta ccagcagtat ctaggagacc 3241 acgaaggaat accacgaagg aatttatgct ccagtgcttg ccataatttg tctgagaagg 3301 aatctgttaa ataaaagctt ttatcctcta aaaaaaaaaa aagaaaaaaa aaaaaaaaa //