LOCUS BC033880 1036 bp mRNA linear HUM 27-SEP-2007 DEFINITION Homo sapiens ATPase, class VI, type 11B, mRNA (cDNA clone IMAGE:5548541), complete cds. ACCESSION BC033880 VERSION BC033880.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1036) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1036) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC033880.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 79 Row: a Column: 14 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1036 /db_xref="H-InvDB:HIT000042012" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5548541" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1036 /gene="ATP11B" /gene_synonym="ATPIF" /gene_synonym="ATPIR" /gene_synonym="DKFZP434J238" /gene_synonym="DKFZP434N1615" /db_xref="GeneID:23200" /db_xref="HGNC:HGNC:13553" /db_xref="MIM:605869" CDS 128..442 /gene="ATP11B" /gene_synonym="ATPIF" /gene_synonym="ATPIR" /gene_synonym="DKFZP434J238" /gene_synonym="DKFZP434N1615" /codon_start=1 /product="ATP11B protein" /protein_id="AAH33880.1" /db_xref="GeneID:23200" /db_xref="HGNC:HGNC:13553" /db_xref="MIM:605869" /translation="MYFVFIQLLSSGSAWFAIILMVVTCLFLDIIKKVFDRHLHPTST EKAQLTETNAGIKCLDSMCCFPEGEAACASVGRMLERVIGRCSPTHISRCEISLSSLC CR" BASE COUNT 283 a 176 c 198 g 379 t ORIGIN 1 gatggctctg gaaactcatt tttggacttg gatcaaccat ctcgttacct ggggatctat 61 tatattttat tttgtatttt ccttgtttta tggagggatt ctctggccat ttttgggctc 121 ccagaatatg tattttgtgt ttattcagct cctgtcaagt ggttctgctt ggtttgccat 181 aatcctcatg gttgttacat gtctatttct tgatatcata aagaaggtct ttgaccgaca 241 cctccaccct acaagtactg aaaaggcaca gcttactgaa acaaatgcag gtatcaagtg 301 cttggactcc atgtgctgtt tcccggaagg agaagcagcg tgtgcatctg ttggaagaat 361 gctggaacga gttataggaa gatgtagtcc aacccacatc agcaggtgtg aaatctctct 421 aagtagcctt tgctgcagat gagtatccta tctggaacag gatgaacctg ccgctctaga 481 tacctaataa atcagcagct ggttttacca actgaagcag gaagtctgct atttattagc 541 actctttggt ggtagatttc actttgtggc tttggggtaa gggctttttc actcacaaag 601 gaagagaaag cacctttgaa gagacttcat ctaatgaaca aaaaattttg tttcataatc 661 tttctaaaat gtgctcagta ggagtgtgtt tatggtactc ttttatggtt tgtataactt 721 tcttttttaa attatacata tactatttcc tttttatttt tttaaaattt ttttgctttt 781 tgtctttaca aaataatctc aacataacag tgaagtcaaa ggctttcctt ttcttactct 841 gtatgtatat tttccagttg gttatttgag gctttgaggt atttataaac acaaaaggct 901 gtatttctgc tcccctacct cttcttatgt ctgtaatgaa gttttgaaat gagtcatgat 961 ttttaagttt cttttgcttg gtatttattg cctaattaaa agtgtatgag ttagaaaaaa 1021 aaaaaaaaaa aaaaaa //