LOCUS BC033880 1036 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class VI, type 11B, mRNA (cDNA clone
IMAGE:5548541), complete cds.
ACCESSION BC033880
VERSION BC033880.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1036)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1036)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC033880.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: a Column: 14
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1036
/db_xref="H-InvDB:HIT000042012"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5548541"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1036
/gene="ATP11B"
/gene_synonym="ATPIF"
/gene_synonym="ATPIR"
/gene_synonym="DKFZP434J238"
/gene_synonym="DKFZP434N1615"
/db_xref="GeneID:23200"
/db_xref="HGNC:HGNC:13553"
/db_xref="MIM:605869"
CDS 128..442
/gene="ATP11B"
/gene_synonym="ATPIF"
/gene_synonym="ATPIR"
/gene_synonym="DKFZP434J238"
/gene_synonym="DKFZP434N1615"
/codon_start=1
/product="ATP11B protein"
/protein_id="AAH33880.1"
/db_xref="GeneID:23200"
/db_xref="HGNC:HGNC:13553"
/db_xref="MIM:605869"
/translation="MYFVFIQLLSSGSAWFAIILMVVTCLFLDIIKKVFDRHLHPTST
EKAQLTETNAGIKCLDSMCCFPEGEAACASVGRMLERVIGRCSPTHISRCEISLSSLC
CR"
BASE COUNT 283 a 176 c 198 g 379 t
ORIGIN
1 gatggctctg gaaactcatt tttggacttg gatcaaccat ctcgttacct ggggatctat
61 tatattttat tttgtatttt ccttgtttta tggagggatt ctctggccat ttttgggctc
121 ccagaatatg tattttgtgt ttattcagct cctgtcaagt ggttctgctt ggtttgccat
181 aatcctcatg gttgttacat gtctatttct tgatatcata aagaaggtct ttgaccgaca
241 cctccaccct acaagtactg aaaaggcaca gcttactgaa acaaatgcag gtatcaagtg
301 cttggactcc atgtgctgtt tcccggaagg agaagcagcg tgtgcatctg ttggaagaat
361 gctggaacga gttataggaa gatgtagtcc aacccacatc agcaggtgtg aaatctctct
421 aagtagcctt tgctgcagat gagtatccta tctggaacag gatgaacctg ccgctctaga
481 tacctaataa atcagcagct ggttttacca actgaagcag gaagtctgct atttattagc
541 actctttggt ggtagatttc actttgtggc tttggggtaa gggctttttc actcacaaag
601 gaagagaaag cacctttgaa gagacttcat ctaatgaaca aaaaattttg tttcataatc
661 tttctaaaat gtgctcagta ggagtgtgtt tatggtactc ttttatggtt tgtataactt
721 tcttttttaa attatacata tactatttcc tttttatttt tttaaaattt ttttgctttt
781 tgtctttaca aaataatctc aacataacag tgaagtcaaa ggctttcctt ttcttactct
841 gtatgtatat tttccagttg gttatttgag gctttgaggt atttataaac acaaaaggct
901 gtatttctgc tcccctacct cttcttatgt ctgtaatgaa gttttgaaat gagtcatgat
961 ttttaagttt cttttgcttg gtatttattg cctaattaaa agtgtatgag ttagaaaaaa
1021 aaaaaaaaaa aaaaaa
//