LOCUS BC033822 1745 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens polynucleotide kinase 3'-phosphatase, mRNA (cDNA clone MGC:45178 IMAGE:5218400), complete cds. ACCESSION BC033822 VERSION BC033822.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1745) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1745) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: p Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31543418. FEATURES Location/Qualifiers source 1..1745 /db_xref="H-InvDB:HIT000041980" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45178 IMAGE:5218400" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1745 /gene="PNKP" /gene_synonym="PNK" /db_xref="GeneID:11284" /db_xref="HGNC:HGNC:9154" /db_xref="MIM:605610" CDS 107..1672 /gene="PNKP" /gene_synonym="PNK" /codon_start=1 /product="polynucleotide kinase 3'-phosphatase" /protein_id="AAH33822.1" /db_xref="GeneID:11284" /db_xref="HGNC:HGNC:9154" /db_xref="MIM:605610" /translation="MGEVEAPGRLWLESPPGGAPPIFLPSDGQALVLGRGPLTQVTDR KCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGVGDTLYLVNGLHPL TLRWEETRTPESQPDTPPGTPLVSQDEKRDAELPKKRMRKSNPGWENLEKLLVFTAAG VKPQGKVAGFDLDGTLITTRSGKVFPTGPSDWRILYPEIPRKLRELEAEGYKLVIFTN QMSIGRGKLPAEEFKAKVEAVVEKLGVPFQVLVATHAGLYRKPVTGMWDHLQEQANDG TPISIGDSIFVGDAAGRPANWAPGRKKKDFSCADRLFALNLGLPFATPEEFFLKWPAA GFELPAFDPRTVSRSGPLCLPESRALLSASPEVVVAVGFPGAGKSTFLKKHLVSAGYV HVNRDTLGSWQRCVTTCETALKQGKRVAIDNTNPDAASRARYVQCARAAGVPCRCFLF TATLEQARHNNRFREMTDSSHIPVSDMVMYGYRKQFEAPTLAEGFSAILEIPFRLWVE PRLGRLYCQFSEG" BASE COUNT 352 a 548 c 555 g 290 t ORIGIN 1 ggaaccgacc gccgccggcc gggttgcagg cggggcacct cgggcaggac ctccctggtc 61 ggaagtggcc gtgagcccaa gccgcggtcc cgggccggca cccaggatgg gcgaggtgga 121 ggccccgggc cgcttgtggc tcgagagccc ccctggggga gcgcccccca tcttcctgcc 181 ctcggacggg caagccctgg tcctgggcag gggacccctg acccaggtta cggaccggaa 241 gtgctccaga actcaagtgg agctggtcgc agatcctgag acccggacag tggcagtgaa 301 acagctggga gttaacccct caactaccgg gacccaggag ttgaagccgg ggttggaggg 361 ctctctgggg gtgggggaca cactgtattt ggtcaatggc ctccacccac tgaccctgcg 421 ctgggaagag acccgcacac cagaatccca gccagatact ccgcctggca cccctctggt 481 gtcccaagat gagaagagag atgctgagct gccgaagaag cgtatgcgga agtcaaaccc 541 cggctgggag aacttggaga agttgctagt gttcaccgca gctggggtga aaccccaggg 601 caaggtggct ggctttgatc tggacgggac gctcatcacc acacgctctg ggaaggtctt 661 tcccactggc cccagtgact ggaggatctt gtacccagag attccccgta agctccgaga 721 gctggaagcc gagggctaca agctggtgat cttcaccaac cagatgagca tcgggcgcgg 781 gaagctgcca gccgaggagt tcaaggccaa ggtggaggct gtggtggaga agctgggggt 841 ccccttccag gtgctggtgg ccacgcacgc aggcttgtac cggaagccgg tgacgggcat 901 gtgggaccat ctgcaggagc aggccaacga cggcacgccc atatccatcg gggacagcat 961 ctttgtggga gacgcagccg gacgcccggc caactgggcc ccggggcgga agaagaaaga 1021 cttctcctgc gccgatcgcc tgtttgccct caaccttggc ctgcccttcg ccacgcctga 1081 ggagttcttt ctcaagtggc cagcagccgg cttcgagctc ccagcctttg atccgaggac 1141 tgtctcccgc tcagggcctc tctgcctccc cgagtccagg gccctcctga gcgccagccc 1201 ggaggtggtt gtcgcagtgg gattccctgg ggccgggaag tccacctttc tcaagaagca 1261 cctcgtgtcg gccggatatg tccacgtgaa cagggacacg ctaggctcct ggcagcgctg 1321 tgtgaccacg tgtgagacag ccctgaagca agggaaacgg gtcgccatcg acaacacaaa 1381 cccagacgcc gcgagccgcg ccaggtacgt ccagtgtgcc cgagccgcgg gcgtcccctg 1441 ccgctgcttc ctcttcaccg ccactctgga gcaggcgcgc cacaacaacc ggtttcgaga 1501 gatgacggac tcctctcata tccccgtgtc agacatggtc atgtatggct acaggaagca 1561 gttcgaggcc ccaacgctgg ctgaaggctt ctctgccatc ctggagatcc cgttccggct 1621 atgggtggag ccgaggctgg ggcggctgta ctgccagttc tccgagggct gagccccgcc 1681 cagctcccct ccacaataaa cgctgtttct ccttgaaaaa aaaaaaaaaa aaaaaaaaaa 1741 aaaaa //