LOCUS BC033822 1745 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens polynucleotide kinase 3'-phosphatase, mRNA (cDNA clone
MGC:45178 IMAGE:5218400), complete cds.
ACCESSION BC033822
VERSION BC033822.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1745)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1745)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543418.
FEATURES Location/Qualifiers
source 1..1745
/db_xref="H-InvDB:HIT000041980"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45178 IMAGE:5218400"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1745
/gene="PNKP"
/gene_synonym="PNK"
/db_xref="GeneID:11284"
/db_xref="HGNC:HGNC:9154"
/db_xref="MIM:605610"
CDS 107..1672
/gene="PNKP"
/gene_synonym="PNK"
/codon_start=1
/product="polynucleotide kinase 3'-phosphatase"
/protein_id="AAH33822.1"
/db_xref="GeneID:11284"
/db_xref="HGNC:HGNC:9154"
/db_xref="MIM:605610"
/translation="MGEVEAPGRLWLESPPGGAPPIFLPSDGQALVLGRGPLTQVTDR
KCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGVGDTLYLVNGLHPL
TLRWEETRTPESQPDTPPGTPLVSQDEKRDAELPKKRMRKSNPGWENLEKLLVFTAAG
VKPQGKVAGFDLDGTLITTRSGKVFPTGPSDWRILYPEIPRKLRELEAEGYKLVIFTN
QMSIGRGKLPAEEFKAKVEAVVEKLGVPFQVLVATHAGLYRKPVTGMWDHLQEQANDG
TPISIGDSIFVGDAAGRPANWAPGRKKKDFSCADRLFALNLGLPFATPEEFFLKWPAA
GFELPAFDPRTVSRSGPLCLPESRALLSASPEVVVAVGFPGAGKSTFLKKHLVSAGYV
HVNRDTLGSWQRCVTTCETALKQGKRVAIDNTNPDAASRARYVQCARAAGVPCRCFLF
TATLEQARHNNRFREMTDSSHIPVSDMVMYGYRKQFEAPTLAEGFSAILEIPFRLWVE
PRLGRLYCQFSEG"
BASE COUNT 352 a 548 c 555 g 290 t
ORIGIN
1 ggaaccgacc gccgccggcc gggttgcagg cggggcacct cgggcaggac ctccctggtc
61 ggaagtggcc gtgagcccaa gccgcggtcc cgggccggca cccaggatgg gcgaggtgga
121 ggccccgggc cgcttgtggc tcgagagccc ccctggggga gcgcccccca tcttcctgcc
181 ctcggacggg caagccctgg tcctgggcag gggacccctg acccaggtta cggaccggaa
241 gtgctccaga actcaagtgg agctggtcgc agatcctgag acccggacag tggcagtgaa
301 acagctggga gttaacccct caactaccgg gacccaggag ttgaagccgg ggttggaggg
361 ctctctgggg gtgggggaca cactgtattt ggtcaatggc ctccacccac tgaccctgcg
421 ctgggaagag acccgcacac cagaatccca gccagatact ccgcctggca cccctctggt
481 gtcccaagat gagaagagag atgctgagct gccgaagaag cgtatgcgga agtcaaaccc
541 cggctgggag aacttggaga agttgctagt gttcaccgca gctggggtga aaccccaggg
601 caaggtggct ggctttgatc tggacgggac gctcatcacc acacgctctg ggaaggtctt
661 tcccactggc cccagtgact ggaggatctt gtacccagag attccccgta agctccgaga
721 gctggaagcc gagggctaca agctggtgat cttcaccaac cagatgagca tcgggcgcgg
781 gaagctgcca gccgaggagt tcaaggccaa ggtggaggct gtggtggaga agctgggggt
841 ccccttccag gtgctggtgg ccacgcacgc aggcttgtac cggaagccgg tgacgggcat
901 gtgggaccat ctgcaggagc aggccaacga cggcacgccc atatccatcg gggacagcat
961 ctttgtggga gacgcagccg gacgcccggc caactgggcc ccggggcgga agaagaaaga
1021 cttctcctgc gccgatcgcc tgtttgccct caaccttggc ctgcccttcg ccacgcctga
1081 ggagttcttt ctcaagtggc cagcagccgg cttcgagctc ccagcctttg atccgaggac
1141 tgtctcccgc tcagggcctc tctgcctccc cgagtccagg gccctcctga gcgccagccc
1201 ggaggtggtt gtcgcagtgg gattccctgg ggccgggaag tccacctttc tcaagaagca
1261 cctcgtgtcg gccggatatg tccacgtgaa cagggacacg ctaggctcct ggcagcgctg
1321 tgtgaccacg tgtgagacag ccctgaagca agggaaacgg gtcgccatcg acaacacaaa
1381 cccagacgcc gcgagccgcg ccaggtacgt ccagtgtgcc cgagccgcgg gcgtcccctg
1441 ccgctgcttc ctcttcaccg ccactctgga gcaggcgcgc cacaacaacc ggtttcgaga
1501 gatgacggac tcctctcata tccccgtgtc agacatggtc atgtatggct acaggaagca
1561 gttcgaggcc ccaacgctgg ctgaaggctt ctctgccatc ctggagatcc cgttccggct
1621 atgggtggag ccgaggctgg ggcggctgta ctgccagttc tccgagggct gagccccgcc
1681 cagctcccct ccacaataaa cgctgtttct ccttgaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaa
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