LOCUS BC033723 2741 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens stromal antigen 3 opposite strand, mRNA (cDNA clone IMAGE:4944517), partial cds. ACCESSION BC033723 VERSION BC033723.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2741) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2741) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: g Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 54020721. FEATURES Location/Qualifiers source 1..2741 /db_xref="H-InvDB:HIT000259064" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4944517" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2741 /gene="STAG3OS" /gene_synonym="GATS" /db_xref="GeneID:352954" /db_xref="HGNC:HGNC:29954" CDS <1..734 /gene="STAG3OS" /gene_synonym="GATS" /codon_start=3 /product="STAG3OS protein" /protein_id="AAH33723.1" /db_xref="GeneID:352954" /db_xref="HGNC:HGNC:29954" /translation="TRPANTSCSPRRHPRAAAPPALPPSTRGSPSQLGGPPPFCPARS GRRRPPRLAPSSGVPGPAVGAGRARRGRGPRLVPQRMSCRGRGAGGRWNSTSWSTGCK LPASPRRVSRCSPTGLIKLAFLFSKTRCKFFSLTETPEDYTIIVDEEGFLELPSSEHL SVADATWLALNVVSGGGSFSSSQPIGMTKIAKSVIAPLADQNISVFMLSTYQTDFILV LKRDLPFVTHTLSSEFTILWSVARL" BASE COUNT 689 a 774 c 727 g 551 t ORIGIN 1 ccacgcgtcc ggcgaacacc agctgctccc cgcgccggca cccgcgcgcc gctgctccgc 61 cggcgctgcc tccctcgacc cgtggctccc cctcgcaact tggcgggcct cctccctttt 121 gtccggcccg gtccggccgc cgccgccccc cgcgcctggc gccgagctcc ggggtccccg 181 ggccggctgt cggtgccggc agggcgcgga gggggcgggg gccgcggctc gtcccccagc 241 ggatgagctg ccgcggacgg ggcgcgggcg gacgatggaa ctccacatcc tggagcaccg 301 gctgcaagtt gccagcgtcg ccaaggagag tatcccgctg ttcacctacg ggcctgatca 361 aacttgcctt cctgttctcc aagaccaggt gcaagttctt cagtctgact gagacaccag 421 aggattacac tatcattgtc gatgaggaag gattcctaga gctgccctcc tcagagcacc 481 tgagtgtggc ggatgccacc tggctggccc tgaacgtggt gtccggcggt ggcagcttct 541 ccagctccca gcctattggc atgaccaaga tcgccaagtc agtcatcgcc ccactggctg 601 accagaacat atccgtgttc atgctgtcca cgtatcagac agacttcatc ctggtgctca 661 agcgggacct gccctttgtc acccacacgt tgtcatcaga gttcaccatc ctgtggtcag 721 tggctagact gtagcagccg agaacctcgg catcaccagt ggcttcgtga agcccaagct 781 ggggccttgg tgtaccttgt tgtagtgttt gaaaacatct gaggctgcat ccatctccag 841 caccccataa agcaacagct tgcagaaccc ggctaggagg cggcgccgct ggtgtagccg 901 ctctatctgt aaatgatcct cctgggaatc acctggctca catggaaggc aaaagggaat 961 cacagactta agcttcctgc cctatatttc tgagctacac ccaagcccca gcccttactg 1021 agccccaggt atagagtcac tgcaccactg cccaggtctc ccggctggat gaagacgtgg 1081 tccatgagga agctggctag ctcagactgg agagtagctt caggaaaaaa gacaagtggc 1141 ctaaggaaat cacggccccc aacaatcatc tgagggctaa agatgagaag tagatcactt 1201 aataagacaa aagcctgtag ggggaaaaga aaggatgttt aaaaggacag aatgtttccc 1261 aaggtagaaa tgacactgtc aatttctcct tggaatgggg gcagggatac tcgccttgtt 1321 gctcccactt gagtcagtac tcacctgctc ctggatctca gtatccacat ctgagaggca 1381 actctggcag agttcacaga aggccaccat tctgtccctc aaactcgaca gctgcttctg 1441 tgggcacagt ggcttgaagg ggaagaatga agacacagac tcctctgttc ccattatccc 1501 atctaagacc cacactcacc tgggaagcat ctgatttaga aatgtgggtt agtgtccaga 1561 gaatggaaaa atagacaaga gtcaaggctg gcaggataac ctgtaacaac aaagggtttg 1621 aaaaatgagg tttgggttag gagagggaga gacagatagc cagaaacaca ccagtgaaga 1681 ggagagaaaa tgagtaaagg gagagctaat tccttttcca gtggaaaatg agtgatattc 1741 tggacattct tcagaggcat ctacacgaag tagaaatgtc accgctccct aatttactct 1801 acgtcttcta gaatccctca atattatcct tggcttccag gaaatccaag aagaccctgg 1861 aagtagagtc caccttctaa gagaggaatg taagaggtga cccccaccca cctgatcttc 1921 ctcgctttgt ccactccacg cactgagact tgacacacct agtggccacc tagaacgtag 1981 gtccttaaaa tctagccccc cagcccccaa cccatctcta gcctgtccac tcacctggtg 2041 aggaacctct cctgtgtcca cagccttctg caggagttgg caacatggct catagagctc 2101 ccagcgagtc aggtcatgag tgctttgggg gagaaagggg aatgttatac tggaaaagaa 2161 cagagggaac caactccaca gacaccagta aaaacgggat ggggaagagg aggaaagcca 2221 ctcacttgta gaaggcagag aggcgtttca gagtggctgc cagattatat acctcatcct 2281 catctaggaa ggacgactga gaaggaaaga agatccacaa tagcatttcc cccagaactc 2341 atcagtccac atcccccgtc ttgcagcccc tcccaccctt gtttggggtg tcccattgtc 2401 cagccccagc tcctacctgt aacagctctt caagctcctg ctggaagcgg tcagtcagca 2461 aatctactag ctggctgcgg gcaaagtccg cccggctgaa gaaagtgaat tcgggattac 2521 agagcaggta gagggcatgc gccccagcct caagcaccgc tggctctgca tgcttcacca 2581 ccacctcctg gagttgctgc aggaacagct ccaggtgctg agaagaaaag gcagaagatg 2641 gtgtgctgtg gggatgggag gaggacactc ttctggcggg aagtggaacg gggttaaaag 2701 cattaaactt caaggataag atgcctaaaa aaaaaaaaaa a //