LOCUS BC033723 2741 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens stromal antigen 3 opposite strand, mRNA (cDNA clone
IMAGE:4944517), partial cds.
ACCESSION BC033723
VERSION BC033723.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2741)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2741)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: g Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54020721.
FEATURES Location/Qualifiers
source 1..2741
/db_xref="H-InvDB:HIT000259064"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4944517"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2741
/gene="STAG3OS"
/gene_synonym="GATS"
/db_xref="GeneID:352954"
/db_xref="HGNC:HGNC:29954"
CDS <1..734
/gene="STAG3OS"
/gene_synonym="GATS"
/codon_start=3
/product="STAG3OS protein"
/protein_id="AAH33723.1"
/db_xref="GeneID:352954"
/db_xref="HGNC:HGNC:29954"
/translation="TRPANTSCSPRRHPRAAAPPALPPSTRGSPSQLGGPPPFCPARS
GRRRPPRLAPSSGVPGPAVGAGRARRGRGPRLVPQRMSCRGRGAGGRWNSTSWSTGCK
LPASPRRVSRCSPTGLIKLAFLFSKTRCKFFSLTETPEDYTIIVDEEGFLELPSSEHL
SVADATWLALNVVSGGGSFSSSQPIGMTKIAKSVIAPLADQNISVFMLSTYQTDFILV
LKRDLPFVTHTLSSEFTILWSVARL"
BASE COUNT 689 a 774 c 727 g 551 t
ORIGIN
1 ccacgcgtcc ggcgaacacc agctgctccc cgcgccggca cccgcgcgcc gctgctccgc
61 cggcgctgcc tccctcgacc cgtggctccc cctcgcaact tggcgggcct cctccctttt
121 gtccggcccg gtccggccgc cgccgccccc cgcgcctggc gccgagctcc ggggtccccg
181 ggccggctgt cggtgccggc agggcgcgga gggggcgggg gccgcggctc gtcccccagc
241 ggatgagctg ccgcggacgg ggcgcgggcg gacgatggaa ctccacatcc tggagcaccg
301 gctgcaagtt gccagcgtcg ccaaggagag tatcccgctg ttcacctacg ggcctgatca
361 aacttgcctt cctgttctcc aagaccaggt gcaagttctt cagtctgact gagacaccag
421 aggattacac tatcattgtc gatgaggaag gattcctaga gctgccctcc tcagagcacc
481 tgagtgtggc ggatgccacc tggctggccc tgaacgtggt gtccggcggt ggcagcttct
541 ccagctccca gcctattggc atgaccaaga tcgccaagtc agtcatcgcc ccactggctg
601 accagaacat atccgtgttc atgctgtcca cgtatcagac agacttcatc ctggtgctca
661 agcgggacct gccctttgtc acccacacgt tgtcatcaga gttcaccatc ctgtggtcag
721 tggctagact gtagcagccg agaacctcgg catcaccagt ggcttcgtga agcccaagct
781 ggggccttgg tgtaccttgt tgtagtgttt gaaaacatct gaggctgcat ccatctccag
841 caccccataa agcaacagct tgcagaaccc ggctaggagg cggcgccgct ggtgtagccg
901 ctctatctgt aaatgatcct cctgggaatc acctggctca catggaaggc aaaagggaat
961 cacagactta agcttcctgc cctatatttc tgagctacac ccaagcccca gcccttactg
1021 agccccaggt atagagtcac tgcaccactg cccaggtctc ccggctggat gaagacgtgg
1081 tccatgagga agctggctag ctcagactgg agagtagctt caggaaaaaa gacaagtggc
1141 ctaaggaaat cacggccccc aacaatcatc tgagggctaa agatgagaag tagatcactt
1201 aataagacaa aagcctgtag ggggaaaaga aaggatgttt aaaaggacag aatgtttccc
1261 aaggtagaaa tgacactgtc aatttctcct tggaatgggg gcagggatac tcgccttgtt
1321 gctcccactt gagtcagtac tcacctgctc ctggatctca gtatccacat ctgagaggca
1381 actctggcag agttcacaga aggccaccat tctgtccctc aaactcgaca gctgcttctg
1441 tgggcacagt ggcttgaagg ggaagaatga agacacagac tcctctgttc ccattatccc
1501 atctaagacc cacactcacc tgggaagcat ctgatttaga aatgtgggtt agtgtccaga
1561 gaatggaaaa atagacaaga gtcaaggctg gcaggataac ctgtaacaac aaagggtttg
1621 aaaaatgagg tttgggttag gagagggaga gacagatagc cagaaacaca ccagtgaaga
1681 ggagagaaaa tgagtaaagg gagagctaat tccttttcca gtggaaaatg agtgatattc
1741 tggacattct tcagaggcat ctacacgaag tagaaatgtc accgctccct aatttactct
1801 acgtcttcta gaatccctca atattatcct tggcttccag gaaatccaag aagaccctgg
1861 aagtagagtc caccttctaa gagaggaatg taagaggtga cccccaccca cctgatcttc
1921 ctcgctttgt ccactccacg cactgagact tgacacacct agtggccacc tagaacgtag
1981 gtccttaaaa tctagccccc cagcccccaa cccatctcta gcctgtccac tcacctggtg
2041 aggaacctct cctgtgtcca cagccttctg caggagttgg caacatggct catagagctc
2101 ccagcgagtc aggtcatgag tgctttgggg gagaaagggg aatgttatac tggaaaagaa
2161 cagagggaac caactccaca gacaccagta aaaacgggat ggggaagagg aggaaagcca
2221 ctcacttgta gaaggcagag aggcgtttca gagtggctgc cagattatat acctcatcct
2281 catctaggaa ggacgactga gaaggaaaga agatccacaa tagcatttcc cccagaactc
2341 atcagtccac atcccccgtc ttgcagcccc tcccaccctt gtttggggtg tcccattgtc
2401 cagccccagc tcctacctgt aacagctctt caagctcctg ctggaagcgg tcagtcagca
2461 aatctactag ctggctgcgg gcaaagtccg cccggctgaa gaaagtgaat tcgggattac
2521 agagcaggta gagggcatgc gccccagcct caagcaccgc tggctctgca tgcttcacca
2581 ccacctcctg gagttgctgc aggaacagct ccaggtgctg agaagaaaag gcagaagatg
2641 gtgtgctgtg gggatgggag gaggacactc ttctggcggg aagtggaacg gggttaaaag
2701 cattaaactt caaggataag atgcctaaaa aaaaaaaaaa a
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