LOCUS BC033004 2987 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens phosphoinositide-3-kinase, class 3, mRNA (cDNA clone MGC:26376 IMAGE:4823337), complete cds. ACCESSION BC033004 VERSION BC033004.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2987) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2987) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC033004.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: f Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34761063. FEATURES Location/Qualifiers source 1..2987 /db_xref="H-InvDB:HIT000041756" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26376 IMAGE:4823337" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2987 /gene="PIK3C3" /gene_synonym="Vps34" /db_xref="GeneID:5289" /db_xref="HGNC:HGNC:8974" /db_xref="MIM:602609" CDS 45..2708 /gene="PIK3C3" /gene_synonym="Vps34" /codon_start=1 /product="phosphoinositide-3-kinase, class 3" /protein_id="AAH33004.1" /db_xref="GeneID:5289" /db_xref="HGNC:HGNC:8974" /db_xref="MIM:602609" /translation="MGEAEKFHYIYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPML KFSGLYQETCSDLYVTCQVFAEGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYPDLPR NAQVALTIWDVYGPGKAVPVGGTTVSLFGKYGMFRQGMHDLKVWPNVEADGSEPTKTP GRTSSTLSEDQMSRLAKLTKAHRQGHMVKVDWLDRLTFREIEMINESEKRSSNFMYLM VEFRCVKCDDKEYGIVYYEKDGDESSPILTSFELVKVPDPQMSMENLVESKHHKLARS LRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFL KCVNWDLPQEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDL LMYLLQLVQALKYENFDDIKNGLEPTKKDSQSSVSENVSNSGINSAEIDSSQIITSPL PSVSSPPPASKTKEVPDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQQ RDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNR KKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFK TEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFM QFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG VGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEF RKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAV HYMQSLIDESVHALFAAVVEQIHKFAQYWRK" BASE COUNT 964 a 545 c 677 g 801 t ORIGIN 1 gtccctaagt tcccgctgta ggtggtacct ttgcagacgg tgcgatgggg gaagcagaga 61 agtttcacta catctatagt tgtgacctgg atatcaacgt ccagcttaag ataggaagct 121 tggaagggaa gagagaacaa aagagttata aagctgtcct ggaagaccca atgttgaagt 181 tctcaggact atatcaagag acatgctctg atctttatgt tacttgtcaa gtttttgcag 241 aagggaagcc tttggccttg ccagtgagaa catcctacaa agcatttagt acaagatgga 301 actggaatga atggctgaaa ctaccagtaa aataccctga cctgcccagg aatgcccaag 361 tggccctcac catatgggat gtgtatggtc ccggaaaagc agtgcctgta ggaggaacaa 421 cggtttcgct ctttggaaaa tacggcatgt ttcgccaagg gatgcatgac ttgaaagtct 481 ggcctaatgt agaagcagat ggatcagaac ccacaaaaac tcctggcaga acaagtagca 541 ctctctcaga agatcagatg agccgtcttg ccaagctcac caaagctcat cgacaaggac 601 acatggtgaa agtagattgg ctggatagat tgacatttag agaaatagaa atgataaatg 661 agagtgaaaa acgaagttct aatttcatgt acctgatggt tgaatttcga tgtgtcaagt 721 gtgatgataa ggaatatggt attgtttatt atgaaaagga cggtgatgaa tcatctccaa 781 ttttaacaag ttttgaatta gtgaaagttc ctgaccccca gatgtctatg gagaatttag 841 ttgagagcaa acaccacaag cttgcccgga gtttaagaag tggaccttct gaccacgatc 901 tgaaacccaa tgctgccacg agagatcagt taaatattat tgtgagttat ccaccaacca 961 agcaacttac atatgaagaa caagatcttg tttggaagtt tagatattat cttacgaatc 1021 aagaaaaagc cttgacaaaa ttcttgaaat gtgttaattg ggatctacct caagaggcca 1081 aacaggcctt ggaacttctg ggaaaatgga agccgatgga tgtagaggac tccttggagc 1141 tgttatcctc tcattacacc aacccaactg tgaggcgtta tgctgttgcc cggttgcgac 1201 aggccgatga tgaggatttg ttgatgtacc tattacaatt ggtccaggct ctcaaatatg 1261 aaaattttga tgatataaag aatggattgg aacctaccaa gaaggatagt cagagttcag 1321 tgtcagaaaa tgtgtcaaat tctggaataa attctgcaga aatagatagc tcccaaatta 1381 taaccagccc ccttccttca gtctcttcac ctcctcctgc atcaaaaaca aaagaagttc 1441 cagatggcga aaatctggaa caagatctct gtaccttctt gatatcgaga gcctgcaaaa 1501 actcaacact ggctaattat ttatactggt atgtgatagt ggaatgtgaa gatcaagata 1561 ctcagcagag agatccaaag acccatgaga tgtacttgaa cgtaatgaga agattcagcc 1621 aagcattgtt gaagggtgat aagtctgtca gagttatgcg ttctttgctg gctgcacaac 1681 agacatttgt agatcggttg gtgcatctaa tgaaggcagt acaacgcgaa agtggaaatc 1741 gtaagaaaaa gaatgagaga ctacaggcat tgcttggaga taatgaaaag atgaatttgt 1801 cagatgtgga acttatcccg ttgcctttag aaccccaagt gaaaattaga ggaataattc 1861 cggaaacagc tacactgttt aaaagtgccc ttatgcctgc acagttgttt tttaagacgg 1921 aagatggagg caaatatcca gttatattta agcatggaga tgatttacgt caagatcaac 1981 ttattcttca aatcatttca ctcatggaca agctgttacg gaaagaaaat ctggacttga 2041 aattgacacc ttataaggtg ttagccacca gtacaaaaca tggcttcatg cagtttatcc 2101 agtcagttcc tgtggctgaa gttcttgata cagagggaag cattcagaac ttttttagaa 2161 aatatgcacc aagtgagaat gggccaaatg ggattagtgc tgaggtcatg gacacttacg 2221 ttaaaagctg tgctggatat tgcgtgatca cctatatact tggagttgga gacaggcacc 2281 tggataacct tttgctaaca aaaacaggca aactcttcca catagacttt ggatatattt 2341 tgggtcggga tccaaagcct cttcctccac caatgaagct gaataaagaa atggtagaag 2401 gaatgggggg cacacagagt gagcagtacc aagagttccg taaacagtgt tacacggctt 2461 tcctccacct gcgaaggtat tctaatctga ttttgaactt gttttccttg atggttgatg 2521 caaacattcc agatattgca cttgaaccag ataaaactgt gaaaaaggtt caggataaat 2581 tccgcttaga cctgtcggat gaagaggctg tgcattacat gcagagtctg attgatgaga 2641 gtgtccatgc tctttttgct gcagtggtgg aacagattca caagtttgcc cagtactgga 2701 gaaaatgaaa ctgggattga cccatcaaga tgcttggctc aataagaaaa ccacgttagg 2761 agcaaccttt gtatattgga gacttcagag taaccagcaa ggaagagaaa tcttaatctt 2821 caagttacca tattttccaa atattgcatg gtacctgagt tctgcttcct tggatgtcat 2881 tgcttaaata tagtcttgaa gggcttgttt tgaaatattg tatatatttt ttcaaatgta 2941 tacattgtta ataaattaag aaatgagaaa caaaaaaaaa aaaaaaa //