LOCUS BC033004 2987 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens phosphoinositide-3-kinase, class 3, mRNA (cDNA clone
MGC:26376 IMAGE:4823337), complete cds.
ACCESSION BC033004
VERSION BC033004.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2987)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2987)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC033004.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: f Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34761063.
FEATURES Location/Qualifiers
source 1..2987
/db_xref="H-InvDB:HIT000041756"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26376 IMAGE:4823337"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2987
/gene="PIK3C3"
/gene_synonym="Vps34"
/db_xref="GeneID:5289"
/db_xref="HGNC:HGNC:8974"
/db_xref="MIM:602609"
CDS 45..2708
/gene="PIK3C3"
/gene_synonym="Vps34"
/codon_start=1
/product="phosphoinositide-3-kinase, class 3"
/protein_id="AAH33004.1"
/db_xref="GeneID:5289"
/db_xref="HGNC:HGNC:8974"
/db_xref="MIM:602609"
/translation="MGEAEKFHYIYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPML
KFSGLYQETCSDLYVTCQVFAEGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYPDLPR
NAQVALTIWDVYGPGKAVPVGGTTVSLFGKYGMFRQGMHDLKVWPNVEADGSEPTKTP
GRTSSTLSEDQMSRLAKLTKAHRQGHMVKVDWLDRLTFREIEMINESEKRSSNFMYLM
VEFRCVKCDDKEYGIVYYEKDGDESSPILTSFELVKVPDPQMSMENLVESKHHKLARS
LRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFL
KCVNWDLPQEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDL
LMYLLQLVQALKYENFDDIKNGLEPTKKDSQSSVSENVSNSGINSAEIDSSQIITSPL
PSVSSPPPASKTKEVPDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQQ
RDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNR
KKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFK
TEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFM
QFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG
VGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEF
RKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAV
HYMQSLIDESVHALFAAVVEQIHKFAQYWRK"
BASE COUNT 964 a 545 c 677 g 801 t
ORIGIN
1 gtccctaagt tcccgctgta ggtggtacct ttgcagacgg tgcgatgggg gaagcagaga
61 agtttcacta catctatagt tgtgacctgg atatcaacgt ccagcttaag ataggaagct
121 tggaagggaa gagagaacaa aagagttata aagctgtcct ggaagaccca atgttgaagt
181 tctcaggact atatcaagag acatgctctg atctttatgt tacttgtcaa gtttttgcag
241 aagggaagcc tttggccttg ccagtgagaa catcctacaa agcatttagt acaagatgga
301 actggaatga atggctgaaa ctaccagtaa aataccctga cctgcccagg aatgcccaag
361 tggccctcac catatgggat gtgtatggtc ccggaaaagc agtgcctgta ggaggaacaa
421 cggtttcgct ctttggaaaa tacggcatgt ttcgccaagg gatgcatgac ttgaaagtct
481 ggcctaatgt agaagcagat ggatcagaac ccacaaaaac tcctggcaga acaagtagca
541 ctctctcaga agatcagatg agccgtcttg ccaagctcac caaagctcat cgacaaggac
601 acatggtgaa agtagattgg ctggatagat tgacatttag agaaatagaa atgataaatg
661 agagtgaaaa acgaagttct aatttcatgt acctgatggt tgaatttcga tgtgtcaagt
721 gtgatgataa ggaatatggt attgtttatt atgaaaagga cggtgatgaa tcatctccaa
781 ttttaacaag ttttgaatta gtgaaagttc ctgaccccca gatgtctatg gagaatttag
841 ttgagagcaa acaccacaag cttgcccgga gtttaagaag tggaccttct gaccacgatc
901 tgaaacccaa tgctgccacg agagatcagt taaatattat tgtgagttat ccaccaacca
961 agcaacttac atatgaagaa caagatcttg tttggaagtt tagatattat cttacgaatc
1021 aagaaaaagc cttgacaaaa ttcttgaaat gtgttaattg ggatctacct caagaggcca
1081 aacaggcctt ggaacttctg ggaaaatgga agccgatgga tgtagaggac tccttggagc
1141 tgttatcctc tcattacacc aacccaactg tgaggcgtta tgctgttgcc cggttgcgac
1201 aggccgatga tgaggatttg ttgatgtacc tattacaatt ggtccaggct ctcaaatatg
1261 aaaattttga tgatataaag aatggattgg aacctaccaa gaaggatagt cagagttcag
1321 tgtcagaaaa tgtgtcaaat tctggaataa attctgcaga aatagatagc tcccaaatta
1381 taaccagccc ccttccttca gtctcttcac ctcctcctgc atcaaaaaca aaagaagttc
1441 cagatggcga aaatctggaa caagatctct gtaccttctt gatatcgaga gcctgcaaaa
1501 actcaacact ggctaattat ttatactggt atgtgatagt ggaatgtgaa gatcaagata
1561 ctcagcagag agatccaaag acccatgaga tgtacttgaa cgtaatgaga agattcagcc
1621 aagcattgtt gaagggtgat aagtctgtca gagttatgcg ttctttgctg gctgcacaac
1681 agacatttgt agatcggttg gtgcatctaa tgaaggcagt acaacgcgaa agtggaaatc
1741 gtaagaaaaa gaatgagaga ctacaggcat tgcttggaga taatgaaaag atgaatttgt
1801 cagatgtgga acttatcccg ttgcctttag aaccccaagt gaaaattaga ggaataattc
1861 cggaaacagc tacactgttt aaaagtgccc ttatgcctgc acagttgttt tttaagacgg
1921 aagatggagg caaatatcca gttatattta agcatggaga tgatttacgt caagatcaac
1981 ttattcttca aatcatttca ctcatggaca agctgttacg gaaagaaaat ctggacttga
2041 aattgacacc ttataaggtg ttagccacca gtacaaaaca tggcttcatg cagtttatcc
2101 agtcagttcc tgtggctgaa gttcttgata cagagggaag cattcagaac ttttttagaa
2161 aatatgcacc aagtgagaat gggccaaatg ggattagtgc tgaggtcatg gacacttacg
2221 ttaaaagctg tgctggatat tgcgtgatca cctatatact tggagttgga gacaggcacc
2281 tggataacct tttgctaaca aaaacaggca aactcttcca catagacttt ggatatattt
2341 tgggtcggga tccaaagcct cttcctccac caatgaagct gaataaagaa atggtagaag
2401 gaatgggggg cacacagagt gagcagtacc aagagttccg taaacagtgt tacacggctt
2461 tcctccacct gcgaaggtat tctaatctga ttttgaactt gttttccttg atggttgatg
2521 caaacattcc agatattgca cttgaaccag ataaaactgt gaaaaaggtt caggataaat
2581 tccgcttaga cctgtcggat gaagaggctg tgcattacat gcagagtctg attgatgaga
2641 gtgtccatgc tctttttgct gcagtggtgg aacagattca caagtttgcc cagtactgga
2701 gaaaatgaaa ctgggattga cccatcaaga tgcttggctc aataagaaaa ccacgttagg
2761 agcaaccttt gtatattgga gacttcagag taaccagcaa ggaagagaaa tcttaatctt
2821 caagttacca tattttccaa atattgcatg gtacctgagt tctgcttcct tggatgtcat
2881 tgcttaaata tagtcttgaa gggcttgttt tgaaatattg tatatatttt ttcaaatgta
2941 tacattgtta ataaattaag aaatgagaaa caaaaaaaaa aaaaaaa
//