LOCUS BC032671 2865 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens SHQ1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:45071 IMAGE:5538687), complete cds. ACCESSION BC032671 VERSION BC032671.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2865) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2865) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: l Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 56550032. FEATURES Location/Qualifiers source 1..2865 /db_xref="H-InvDB:HIT000092754" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45071 IMAGE:5538687" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2865 /gene="SHQ1" /gene_synonym="FLJ10539" /db_xref="GeneID:55164" /db_xref="HGNC:HGNC:25543" CDS 112..1845 /gene="SHQ1" /gene_synonym="FLJ10539" /codon_start=1 /product="SHQ1 homolog (S. cerevisiae)" /protein_id="AAH32671.1" /db_xref="GeneID:55164" /db_xref="HGNC:HGNC:25543" /translation="MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKP YFLRLTLPGRIVENGSEQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRT AKPLVEEIGASEIPEEVVDDEEFDWEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQR LQDELSDVIDIKDPDFTPAAERRQKRLAAELAKFDPDHYLADFFEDEAIEQILKYNPW WTDKYSKMMAFLEKSQEQENHATLVSFSEEEKYQLRKFVNKSYLLDKRACRQVCYSLI DILLAYCYETRVTEGEKNVESAWNIRKLSPTLCWFETWTNVHDIMVSFGRRVLCYPLY RHFKLVMKAYRDTIKILQLGKSAVLKCLLDIHKIFQENDPAYILNDLYISDYCVWIQK VKSKKLAALAEALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCS SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGG VRRNTAIQESDASQGKPLASSWPLGVSGPLIEELGEQLKTTVQVSEPKGTTAVNRSNI QERDGCQTPNN" BASE COUNT 813 a 573 c 663 g 816 t ORIGIN 1 ccacgcgtcc gacaccgaga gttcctgcgc gtggggagtt ggagagtttg cgtggcggga 61 acgcggcggc agtgagagcg agcggcgccg gcccttgcgt ccggtgcggc gatgctgacc 121 ccggcgttcg acctcagcca ggatccggac ttcctgacta tcgccatccg cgtgccctac 181 gcccgggtct ccgagttcga cgtctacttc gaggggtctg acttcaagtt ctacgccaag 241 ccatactttc tcagattaac ccttcctgga agaattgtag aaaatggaag tgagcaaggg 301 tcctatgatg cagataaagg aatttttacc attcgcctgc ccaaagaaac ccctggccag 361 cattttgagg ggctgaacat gttaactgct cttctggcac caagaaaatc caggacagca 421 aaaccacttg tggaagaaat aggtgcttct gagattcctg aggaagtagt tgacgatgaa 481 gagtttgatt gggaaattga gcagacaccc tgtgaagagg tatcagaaag tgctttgaat 541 ccgcagtgcc actatggatt tggaaactta cgatcaggag tgttgcaacg gttacaggat 601 gaactgagtg atgttattga tattaaggat ccagatttca cccctgcagc tgaacgaaga 661 cagaagcgcc tggccgctga gctggccaag tttgatcctg atcattatct agctgacttt 721 tttgaagatg aggcgattga acagattttg aagtataatc cttggtggac tgacaaatat 781 tcaaaaatga tggccttttt ggaaaagagt caggaacaag aaaatcatgc tacattagtg 841 tctttttctg aagaagagaa gtatcagcta cgaaaatttg tcaataaatc ttatctgctg 901 gacaagagag cctgtcgtca agtgtgctac agtttgattg atatccttct ggcatattgc 961 tatgaaaccc gtgtcactga aggagagaag aatgttgaat ctgcatggaa tatcaggaaa 1021 ctgagtccaa cactatgctg gtttgagact tggactaacg ttcatgatat catggtgtct 1081 tttggaagaa gggtgttgtg ttacccactc tatcgccatt tcaagctggt gatgaaggcc 1141 tacagggaca ctataaagat attgcaactg ggtaaaagtg cagttttaaa gtgtctcctg 1201 gatattcaca aaatttttca ggaaaatgac ccagcgtaca tactgaatga tctctacatc 1261 tcagactact gtgtgtggat tcagaaagtc aaatccaaaa agttggcagc tcttgcagaa 1321 gccttaaagg aagtctccct tacaaaggcc cagctggggt tagaactgga agaactagaa 1381 gcagcagcac tgcttgtcca ggaggaagaa actgcattaa aagcagccca ttcagtttct 1441 gggcagcaga cactttgctc cagctctgag gcaagtgatt cggaggactc agacagcagc 1501 gtgtcatctg gaaacgaaga ctcaggctca gattcagaac aagatgaact caaagatagt 1561 ccatctgaga cagtcagttc tttgcaaggt ccctttcttg aagaaagcag tgcctttctt 1621 attgttgatg gtggagtacg cagaaacaca gccatccagg agtctgatgc cagtcaggga 1681 aagccacttg cctcttcctg gcctcttgga gtgtctgggc ctctgataga ggagcttggg 1741 gaacaactga agactacagt tcaggtttct gaacccaagg gcaccactgc tgtaaaccgc 1801 agcaatattc aggagagaga cggctgtcag acaccaaata attgactctt aggtggtttt 1861 attcattgtt gagaaatatg gtagattggg tttcatttac cgaatgagaa ttcttcattt 1921 tcactttgta atttttctta gtatatagtc agcccactgt atttgtgtgt tccacatctg 1981 tggattcaac caactgcaga tcaaaaatat tgaagaaaaa atcgcatctg taccaaacat 2041 gtacagactt ttttcttgtt attattctct aaataataca gtatgacaac tatttccaca 2101 gcatttacat tgtattgggt aatataagta atctagtgat gatttaaact gtgcaggagg 2161 atgtgggtag gttatatgca aatactgcac cattttttat caggggcttg agcatctgag 2221 gattttagta tcctcaggag tcctggaacc aaccccccac agatacgggg acaactttat 2281 gacattgttt ttcaaccaat gaatgtttat accttttgtt ttccttgccg cgactgtgaa 2341 gataaagttc aaaagtattt ttaccaaagt gtagctaata tttcaagctg aaaataatag 2401 ttctactgcc cgtgtctcca gaatgtagag cccatcaata tttttatttt aggaggtgta 2461 cttgacaccc aataaactgc acgtatcaaa agtgtacaat gtgttggcgt atgtataccc 2521 tgcgtaaaac tatcaccaca actgaagtga ggaacggacc catcattccc aagtgccctt 2581 gtgccctgtt attagtttgc atgtcctaga attctatgta aattgaatca tacaatatgt 2641 atcccttttt tggtcaggca tattttactc agtatagtta ttttgagatt catccatgtg 2701 gtagcatgtg tcacgagttt ttgtttttat gtttttcatt gctgagtact gcttcattga 2761 atagatttgt tcattgacct atcgatggac acctgggttg tttccagttt ggggctgtta 2821 taaataaagc tgttatgaac atttgtgtac aaaaaaaaaa aaaaa //