LOCUS BC032671 2865 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens SHQ1 homolog (S. cerevisiae), mRNA (cDNA clone
MGC:45071 IMAGE:5538687), complete cds.
ACCESSION BC032671
VERSION BC032671.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2865)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2865)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: l Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56550032.
FEATURES Location/Qualifiers
source 1..2865
/db_xref="H-InvDB:HIT000092754"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45071 IMAGE:5538687"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2865
/gene="SHQ1"
/gene_synonym="FLJ10539"
/db_xref="GeneID:55164"
/db_xref="HGNC:HGNC:25543"
CDS 112..1845
/gene="SHQ1"
/gene_synonym="FLJ10539"
/codon_start=1
/product="SHQ1 homolog (S. cerevisiae)"
/protein_id="AAH32671.1"
/db_xref="GeneID:55164"
/db_xref="HGNC:HGNC:25543"
/translation="MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKP
YFLRLTLPGRIVENGSEQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRT
AKPLVEEIGASEIPEEVVDDEEFDWEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQR
LQDELSDVIDIKDPDFTPAAERRQKRLAAELAKFDPDHYLADFFEDEAIEQILKYNPW
WTDKYSKMMAFLEKSQEQENHATLVSFSEEEKYQLRKFVNKSYLLDKRACRQVCYSLI
DILLAYCYETRVTEGEKNVESAWNIRKLSPTLCWFETWTNVHDIMVSFGRRVLCYPLY
RHFKLVMKAYRDTIKILQLGKSAVLKCLLDIHKIFQENDPAYILNDLYISDYCVWIQK
VKSKKLAALAEALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCS
SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGG
VRRNTAIQESDASQGKPLASSWPLGVSGPLIEELGEQLKTTVQVSEPKGTTAVNRSNI
QERDGCQTPNN"
BASE COUNT 813 a 573 c 663 g 816 t
ORIGIN
1 ccacgcgtcc gacaccgaga gttcctgcgc gtggggagtt ggagagtttg cgtggcggga
61 acgcggcggc agtgagagcg agcggcgccg gcccttgcgt ccggtgcggc gatgctgacc
121 ccggcgttcg acctcagcca ggatccggac ttcctgacta tcgccatccg cgtgccctac
181 gcccgggtct ccgagttcga cgtctacttc gaggggtctg acttcaagtt ctacgccaag
241 ccatactttc tcagattaac ccttcctgga agaattgtag aaaatggaag tgagcaaggg
301 tcctatgatg cagataaagg aatttttacc attcgcctgc ccaaagaaac ccctggccag
361 cattttgagg ggctgaacat gttaactgct cttctggcac caagaaaatc caggacagca
421 aaaccacttg tggaagaaat aggtgcttct gagattcctg aggaagtagt tgacgatgaa
481 gagtttgatt gggaaattga gcagacaccc tgtgaagagg tatcagaaag tgctttgaat
541 ccgcagtgcc actatggatt tggaaactta cgatcaggag tgttgcaacg gttacaggat
601 gaactgagtg atgttattga tattaaggat ccagatttca cccctgcagc tgaacgaaga
661 cagaagcgcc tggccgctga gctggccaag tttgatcctg atcattatct agctgacttt
721 tttgaagatg aggcgattga acagattttg aagtataatc cttggtggac tgacaaatat
781 tcaaaaatga tggccttttt ggaaaagagt caggaacaag aaaatcatgc tacattagtg
841 tctttttctg aagaagagaa gtatcagcta cgaaaatttg tcaataaatc ttatctgctg
901 gacaagagag cctgtcgtca agtgtgctac agtttgattg atatccttct ggcatattgc
961 tatgaaaccc gtgtcactga aggagagaag aatgttgaat ctgcatggaa tatcaggaaa
1021 ctgagtccaa cactatgctg gtttgagact tggactaacg ttcatgatat catggtgtct
1081 tttggaagaa gggtgttgtg ttacccactc tatcgccatt tcaagctggt gatgaaggcc
1141 tacagggaca ctataaagat attgcaactg ggtaaaagtg cagttttaaa gtgtctcctg
1201 gatattcaca aaatttttca ggaaaatgac ccagcgtaca tactgaatga tctctacatc
1261 tcagactact gtgtgtggat tcagaaagtc aaatccaaaa agttggcagc tcttgcagaa
1321 gccttaaagg aagtctccct tacaaaggcc cagctggggt tagaactgga agaactagaa
1381 gcagcagcac tgcttgtcca ggaggaagaa actgcattaa aagcagccca ttcagtttct
1441 gggcagcaga cactttgctc cagctctgag gcaagtgatt cggaggactc agacagcagc
1501 gtgtcatctg gaaacgaaga ctcaggctca gattcagaac aagatgaact caaagatagt
1561 ccatctgaga cagtcagttc tttgcaaggt ccctttcttg aagaaagcag tgcctttctt
1621 attgttgatg gtggagtacg cagaaacaca gccatccagg agtctgatgc cagtcaggga
1681 aagccacttg cctcttcctg gcctcttgga gtgtctgggc ctctgataga ggagcttggg
1741 gaacaactga agactacagt tcaggtttct gaacccaagg gcaccactgc tgtaaaccgc
1801 agcaatattc aggagagaga cggctgtcag acaccaaata attgactctt aggtggtttt
1861 attcattgtt gagaaatatg gtagattggg tttcatttac cgaatgagaa ttcttcattt
1921 tcactttgta atttttctta gtatatagtc agcccactgt atttgtgtgt tccacatctg
1981 tggattcaac caactgcaga tcaaaaatat tgaagaaaaa atcgcatctg taccaaacat
2041 gtacagactt ttttcttgtt attattctct aaataataca gtatgacaac tatttccaca
2101 gcatttacat tgtattgggt aatataagta atctagtgat gatttaaact gtgcaggagg
2161 atgtgggtag gttatatgca aatactgcac cattttttat caggggcttg agcatctgag
2221 gattttagta tcctcaggag tcctggaacc aaccccccac agatacgggg acaactttat
2281 gacattgttt ttcaaccaat gaatgtttat accttttgtt ttccttgccg cgactgtgaa
2341 gataaagttc aaaagtattt ttaccaaagt gtagctaata tttcaagctg aaaataatag
2401 ttctactgcc cgtgtctcca gaatgtagag cccatcaata tttttatttt aggaggtgta
2461 cttgacaccc aataaactgc acgtatcaaa agtgtacaat gtgttggcgt atgtataccc
2521 tgcgtaaaac tatcaccaca actgaagtga ggaacggacc catcattccc aagtgccctt
2581 gtgccctgtt attagtttgc atgtcctaga attctatgta aattgaatca tacaatatgt
2641 atcccttttt tggtcaggca tattttactc agtatagtta ttttgagatt catccatgtg
2701 gtagcatgtg tcacgagttt ttgtttttat gtttttcatt gctgagtact gcttcattga
2761 atagatttgt tcattgacct atcgatggac acctgggttg tttccagttt ggggctgtta
2821 taaataaagc tgttatgaac atttgtgtac aaaaaaaaaa aaaaa
//