LOCUS       BC032363                1405 bp    mRNA    linear   HUM 07-AUG-2008
DEFINITION  Homo sapiens claudin 5, mRNA (cDNA clone MGC:40358 IMAGE:5242567),
            complete cds.
ACCESSION   BC032363
VERSION     BC032363.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1405)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 64 Row: o Column: 22
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 38570041.
FEATURES             Location/Qualifiers
     source          1..1405
                     /db_xref="H-InvDB:HIT000041511"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:40358 IMAGE:5242567"
                     /tissue_type="Brain, fetal, whole pooled"
                     /clone_lib="NIH_MGC_121"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1405
                     /gene="CLDN5"
                     /gene_synonym="BEC1"
                     /gene_synonym="CPETRL1"
                     /db_xref="GeneID:7122"
                     /db_xref="HGNC:HGNC:2047"
                     /db_xref="MIM:602101"
     CDS             146..802
                     /gene="CLDN5"
                     /gene_synonym="BEC1"
                     /gene_synonym="CPETRL1"
                     /codon_start=1
                     /product="claudin 5"
                     /protein_id="AAH32363.1"
                     /db_xref="GeneID:7122"
                     /db_xref="HGNC:HGNC:2047"
                     /db_xref="MIM:602101"
                     /translation="MGSAALEILGLVLCLVGWGGLILACGLPMWQVTAFLDHNIVTAQ
                     TTWKGLWMSCVVQSTGHMQCKVYDSVLALSTEVQAARALTVSAVLLAFVALFVTLAGA
                     QCTTCVAPGPAKARVALTGGVLYLFCGLLALVPLCWFANIVVREFYDPSVPVSQKYEL
                     GAALYIGWAATALLMVGGCLLCCGAWVCTGRPDLSFPVKYSAPRRPTATGDYDKKNYV
                     "
BASE COUNT          223 a          449 c          484 g          249 t
ORIGIN      
        1 ggaggtgcga cagacccgcg gggcaaacgg actggggcca agagccggga gcgcgggcgc
       61 aaaggcacca gggcccgccc agggcgccgc gcagcacggc cttgggggtt ctgcgggcct
      121 tcgggtgcgc gtctcgcctc tagccatggg gtccgcagcg ttggagatcc tgggcctggt
      181 gctgtgcctg gtgggctggg ggggtctgat cctggcgtgc gggctgccca tgtggcaggt
      241 gaccgccttc ctggaccaca acatcgtgac ggcgcagacc acctggaagg ggctgtggat
      301 gtcgtgcgtg gtgcagagca ccgggcacat gcagtgcaaa gtgtacgact cggtgctggc
      361 tctgagcacc gaggtgcagg cggcgcgggc gctcaccgtg agcgccgtgc tgctggcgtt
      421 cgttgcgctc ttcgtgaccc tggcgggcgc gcagtgcacc acctgcgtgg ccccgggccc
      481 ggccaaggcg cgtgtggccc tcacgggagg cgtgctctac ctgttttgcg ggctgctggc
      541 gctcgtgcca ctctgctggt tcgccaacat tgtcgtccgc gagttttacg acccgtctgt
      601 gcccgtgtcg cagaagtacg agctgggcgc agcgctgtac atcggctggg cggccaccgc
      661 gctgctcatg gtaggcggct gcctcttgtg ctgcggcgcc tgggtctgca ccggccgtcc
      721 cgacctcagc ttccccgtga agtactcagc gccgcggcgg cccacggcca ccggcgacta
      781 cgacaagaag aactacgtct gagggcgctg ggcacggccg ggcccctcct gccagccacg
      841 cctgcgaggc gttggataag cctggggagc cccgcatgga ccgcggcttc cgccgggtag
      901 cgcggcgcgc aggctcctcg gaacgtccgg ctctgcgccc cgacgcggct cctggatccg
      961 ctcctgcctg cgcccgcagc tgaccttctc ctgccactag cccggccctg cccttaacag
     1021 acggaatgaa gtttcctttt ctgtgcgcgg cgctgtttcc ataggcagag cgggtgtcag
     1081 actgaggatt tcgcttcccc tccaagacgc tgggggtctt ggctgctgcc ttacttccca
     1141 gaggctcctg ctgacttcgg aggggcggat gcagagccca gggcccccac cggaagatgt
     1201 gtacagctgg tctttactcc atcggcaggg cccgagccca gggaccagtg acttggcctg
     1261 gacctcccgg tctcactcca gcatctcccc aggcaaggct tgtgggcacc ggagcttgag
     1321 agagggcggg agtgggaagg ctaagaatct gcttagtaaa tggtttgaac tctcaaaaaa
     1381 aaaaaaaaaa aaaaaaaaaa aaaaa
//