LOCUS BC031476 4288 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ST6 beta-galactosamide alpha-2,6-sialyltranferase 1, mRNA (cDNA clone MGC:17105 IMAGE:4339124), complete cds. ACCESSION BC031476 VERSION BC031476.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4288) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4288) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: o Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27765094 This clone grew slowly and was rescued by PCR. FEATURES Location/Qualifiers source 1..4288 /db_xref="H-InvDB:HIT000259028" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17105 IMAGE:4339124" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4288 /gene="ST6GAL1" /gene_synonym="CD75" /gene_synonym="MGC48859" /gene_synonym="ST6Gal I" /gene_synonym="ST6GalI" /db_xref="GeneID:6480" /db_xref="HGNC:HGNC:10860" /db_xref="MIM:109675" CDS 305..1525 /gene="ST6GAL1" /gene_synonym="CD75" /gene_synonym="MGC48859" /gene_synonym="ST6Gal I" /gene_synonym="ST6GalI" /codon_start=1 /product="ST6 beta-galactosamide alpha-2,6-sialyltranferase 1" /protein_id="AAH31476.1" /db_xref="GeneID:6480" /db_xref="HGNC:HGNC:10860" /db_xref="MIM:109675" /translation="MIHTNLKKKFSCCVLVFLLFAVICVWKEKKKGSYYDSFKLQTKE FQVLKSLGKLAMGSDSQSVSSSSTQDPHRGRQTLGSLRGLAKAKPEASFQVWNKDSSS KNLIPRLQKIWKNYLSMNKYKVSYKGPGPGIKFSAEALRCHLRDHVNVSMVEVTDFPF NTSEWEGYLPKESIRTKAGPWGRCAVVSSAGSLKSSQLGREIDDHDAVLRFNGAPTAN FQQDVGTKTTIRLMNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYN FFNNYKTYRKLHPNQPFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTL CDQVDIYEFLPSKRKTDVCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYL LGKATLPGFRTIHC" BASE COUNT 1077 a 1066 c 995 g 1150 t ORIGIN 1 gttcctgtag ggcggcacaa ccagggaggg cgtggaagct ctgcatccct tctcccatac 61 cttgctctac acatctcttc atctgtatcc tctgcagcat ccttgatgat aaaccagtaa 121 atatgagttt tgatcatcct gagaaaaatg ggccttggcc tgcagaccca ataaaccttc 181 cctcccatgg ataatagtgc taattcctga ggacctgaag ggcctgccgc ccctggggga 241 ttagccagaa gcaggcttgt tttcctgctc agaacaaagt gacttccctg aacacatctt 301 cattatgatt cacaccaacc tgaagaaaaa gttcagctgc tgcgtcctgg tctttcttct 361 gtttgcagtc atctgtgtgt ggaaggaaaa gaagaaaggg agttactatg attcctttaa 421 attgcaaacc aaggaattcc aggtgttaaa gagtctgggg aaattggcca tggggtctga 481 ttcccagtct gtatcctcaa gcagcaccca ggacccccac aggggccgcc agaccctcgg 541 cagtctcaga ggcctagcca aggccaaacc agaggcctcc ttccaggtgt ggaacaagga 601 cagctcttcc aaaaacctta tccctaggct gcaaaagatc tggaagaatt acctaagcat 661 gaacaagtac aaagtgtcct acaaggggcc aggaccaggc atcaagttca gtgcagaggc 721 cctgcgctgc cacctccggg accatgtgaa tgtatccatg gtagaggtca cagattttcc 781 cttcaatacc tctgaatggg agggttatct gcccaaggag agcattagga ccaaggctgg 841 gccttggggc aggtgtgctg ttgtgtcgtc agcgggatct ctgaagtcct cccaactagg 901 cagagaaatc gatgatcatg acgcagtcct gaggtttaat ggggcaccca cagccaactt 961 ccaacaagat gtgggcacaa aaactaccat tcgcctgatg aactctcagt tggttaccac 1021 agagaagcgc ttcctcaaag acagtttgta caatgaagga atcctaattg tatgggaccc 1081 atctgtatac cactcagata tcccaaagtg gtaccagaat ccggattata atttctttaa 1141 taactacaag acttatcgta agctgcaccc caatcagccc ttttacatcc tcaagcccca 1201 gatgccttgg gagctatggg acattcttca agaaatctcc ccagaagaga ttcagccaaa 1261 ccccccatcc tctgggatgc ttggtatcat catcatgatg acgctgtgtg accaggtgga 1321 tatttatgag ttcctcccat ccaagcgcaa gactgacgtg tgctactact accagaagtt 1381 cttcgatagt gcctgcacga tgggtgccta ccacccgctg ctctatgaga agaatttggt 1441 gaagcatctc aaccagggca cagatgagga catctacctg cttggaaaag ccacactgcc 1501 tggcttccgg accattcact gctaagcaca ggctcctcac tcttctccat caggcattaa 1561 atgaatggtc tcttggccac cccagcctgg gaagaacatt ttcctgaaca attccagcct 1621 gctcctttta ctctaggggc ctctgtcagc aagaccatgg ggacttcaag agcctgtggt 1681 caggaaatca ggtccagcct tccctgtagc cagacagttt atgagcccag agcctcctgc 1741 cacacacatg cacacatatc tagcattctt tccagacagc atcctccccg ccttccacct 1801 tggtagatgc aaggtctatc tctcccatca gggctgccaa agctgggctt tgtttttccc 1861 agcagaatga tgccattctc acaaaccaat gctctatatt gcttgaagtc tgcatctaaa 1921 tattgatttc acgttttaaa gaaattctct taaattacaa ttgtgcccaa tgcagggtgg 1981 ctctgggggg caagtaggtg gtacagggga ttggaaacat gctccgcgcc tccagagaaa 2041 agttgctccc gaggtccatg cccctggaac gtgttcctat cactctggct ggttgggctg 2101 gtccttagac tgggtgctta tgattaaagg gtcttggtta gcccactttc cctctccatg 2161 tggagatgga aggtagagaa ggatacagtg tctatcctca agttgctacg gttcagtgag 2221 agaggcagac atctgaacag gcaggtagga ttcagtgtgc tcagtgcact ggggatttgg 2281 agagagatgg gcttgctctc tctgtgcacc caggagggcc acgcacttaa aactgtgttt 2341 gtggatcaga gaaggcttta tagcacaggg ggcattcaga tgagtcttag aggaagagaa 2401 gaaacatggc aagcagatta catctgagcc gtttgaattg tgtttttctt tcttcccatg 2461 tttattttct aagatctacc tgaacttaga gactcaagat atttttttag gaaacctcct 2521 acccatgtct gaggtagcaa gtgcagcctc acgacagata ccaggcaatc cagagccaca 2581 aaacgtgatt cctccaggct ctgcctggcc tgaccctgtc ctgtcagctg ggtttacata 2641 ccagtcccat tcttcctttt caatacctac ccccaaatct tctcctaacc accatctgtt 2701 tttttttttt aaagcatttt ttgctttaaa agcatcctga ccccaatttc tttgagctca 2761 cgggcctttt gctgaaggtc tctcagggtg tagtggtgtg gctctctgga cttaacgtca 2821 ctctcagagg tcagaacctt ggagatcaga actgattctc accaggtgtg agaggtgtgg 2881 tagcagattg caatgctctg cacctcttcc ttgcaagtga gcaacttcag gctctctggg 2941 cagaggctgg cccactgtag tttgcagaca tgctctccag atggttttac taagtcccct 3001 ctccctgata gggaatcctg ctggaccagc gcagccctgg tgtggagagg ttaaaagact 3061 tgcacaggat caccaagtca tgctgtagag ccaggattcc tagacccagg gctctgcact 3121 ctcaaggctg gccccatgtg ctcaagggga tctaatgttt gggctccaaa ctaaccatct 3181 cggagctggg ctcctcattt actgccaaac cctcagctta tgtagctaga aagggccctg 3241 gagtgagaaa gcctggattt tcaaattgat gctcccctac tgactagctg tgccactctg 3301 ggcaaatgct cttccttgag cctgtttcca cacctgtaaa gtggggatga tgatcctatc 3361 tcactgcttt tgtgaggatt acaggaaagc acctgtcctg gctctgtacc tggcacgtag 3421 taggtgctca gttcatgctg gtttccttcc tgcctttagt agggacctgc tctgtgctca 3481 cacctcggct gcatgcaccc tgctgtgacg gaggctagtg tggaagaggt cctgtcctca 3541 gggaattaac tgtcttattg ggagacaata actgtcctcc ttggaacacc caagaaacca 3601 tgcaaagcag tggacaacac agaacacgcc ctcctcctcg ctgcctgcag ctccaatctg 3661 attctgcttg ggaatgggcg gagcacgtgg gctgcttaac tgctgtatag gacaagcccc 3721 ttacccctct ctgggcccat gaattcctgg cttggtttat gttctgattt gacacactga 3781 ttttaatctt cgaatcatga cactgagtgc agaggaggtg gcattccgac agcaggacat 3841 acatgttggt gtgaagactg ggacgacact gggtagaatc tagtttttaa ttattattaa 3901 tataaaggat caaattaatt taaatatgat tctgaagtct acagaacttt tagttctgtg 3961 ctgtctatgt ggacactttg gtaaaatgca aattatgata tggacgttat cattggtctg 4021 gtgagatgtt tcatatttgt gacagttaat ttaaaaatta tgacttaatg ctgcctgtgt 4081 ctatggggtt ctgtcttctt tgatagccat ctattcatct ggatcatggg accctctcta 4141 atccttccac caatcaaata agctattgct attggtttgg agttgagata tcagtctcgg 4201 aaacttctga aaaatgctaa taattaccca aggattatgt caaattttaa aataaatgtg 4261 tgtgtgtttc tttaaaaaaa aaaaaaaa //