LOCUS BC030592 3912 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens ArfGAP with FG repeats 1, mRNA (cDNA clone MGC:26523 IMAGE:4836885), complete cds. ACCESSION BC030592 VERSION BC030592.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3912) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3912) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC030592.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 34 Row: k Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38570131. FEATURES Location/Qualifiers source 1..3912 /db_xref="H-InvDB:HIT000041059" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26523 IMAGE:4836885" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3912 /gene="AGFG1" /gene_synonym="RAB" /gene_synonym="RIP" /db_xref="GeneID:3267" /db_xref="HGNC:HGNC:5175" /db_xref="MIM:600862" CDS 85..1773 /gene="AGFG1" /gene_synonym="RAB" /gene_synonym="RIP" /codon_start=1 /product="ArfGAP with FG repeats 1" /protein_id="AAH30592.1" /db_xref="GeneID:3267" /db_xref="HGNC:HGNC:5175" /db_xref="MIM:600862" /translation="MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTV GSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSS AIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPL KSLLGDSAPTLHLNKGTPSQSPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTAT ANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAA SVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKVSTNKAGLQTADKYAALANLD NIFSAGQGGDQGSGFGTTGKAPVGSVVSVPSQSSASSDKYAALAELDSVFSSAATSSN AYTSTSNASSNVFGTVPVVASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNP FQTNARGATAATFGTASMSMPTGFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFS QQPNGAGFAAFGQTKPVVTPFGQVAAAGVSSNPFMTGAPTGQFPTGSSSTNPFL" BASE COUNT 1140 a 801 c 762 g 1209 t ORIGIN 1 agggaggccc gtgggaccgc gggcccccgg cgcagcgctg cccggctccc ggccctgccg 61 gcctcctccc ttggcgccgc ggccatggcg gccagcgcga agcggaagca ggaggagaag 121 cacctgaaga tgctgcggga catgaccggc ctcccgcaca accgaaagtg cttcgactgc 181 gaccagcgcg gccccaccta cgttaacatg acggtcggct ccttcgtgtg tacctcctgc 241 tccggcagcc tgcgaggatt aaatccacca cacagggtga aatctatctc catgacaaca 301 ttcacacaac aggaaattga attcttacaa aaacatggaa atgaagtctg taagcagatt 361 tggctaggat tatttgatga tagatcttca gcaattccag acttcaggga tccacaaaaa 421 gtgaaagagt ttctacaaga aaagtatgaa aagaaaagat ggtatgtccc gccagaacaa 481 gccaaagtcg tggcatcagt tcatgcatct atttcagggt cctctgccag tagcacaagc 541 agcacacctg aggtcaaacc actgaaatct cttttagggg attctgcacc aacactgcac 601 ttaaataagg gcacacctag tcagtcccca gttgtaggtc gttctcaagg gcagcagcag 661 gagaagaagc aatttgacct tttaagtgat ctcggctcag acatctttgc tgctccagct 721 cctcagtcaa cagctacagc caattttgct aactttgcac atttcaacag tcatgcagct 781 cagaattctg caaatgcaga ttttgcaaac tttgatgcat ttggacagtc tagtggttcg 841 agtaattttg gaggtttccc cacagcaagt cactctcctt ttcagcccca aactacaggt 901 ggaagtgctg catcagtaaa tgctaatttt gctcattttg ataacttccc caaatcctcc 961 agtgctgatt ttggaacctt caatacttcc cagagtcatc aaacagcatc agctgttagt 1021 aaagtttcaa cgaacaaagc tggtttacag actgcagaca aatatgcagc acttgctaat 1081 ttagacaata tcttcagtgc cgggcaaggt ggtgatcagg gaagtggctt tgggaccaca 1141 ggtaaagctc ctgttggttc tgtggtttca gttcccagtc agtcaagtgc atcttcagac 1201 aagtatgcag ctctggcaga actagacagc gttttcagtt ctgcagccac ctccagtaat 1261 gcgtatactt ccacaagtaa tgctagcagc aatgtttttg gaacagtgcc agtggttgct 1321 tctgcacaga cacagcctgc ttcatcaagt gtgcctgctc catttggagc tacgccttcc 1381 acaaatccat ttgttgctgc tgctggtcct tctgtggcat cttctacaaa cccatttcag 1441 accaatgcca gaggagcaac agcggcaacc tttggcactg catccatgag catgcccacg 1501 ggattcggca ctcctgctcc ctacagtctt cccaccagct ttagtggcag ctttcagcag 1561 cctgcctttc cagcccaagc agctttccct caacagacag ctttttctca acagcccaat 1621 ggtgcaggtt ttgcagcatt tggacaaaca aagccagtag taaccccttt tggtcaagtt 1681 gcagctgctg gagtatctag taatcctttt atgactggtg caccaacagg acaatttcca 1741 acaggaagct catcaaccaa tcctttctta tagccttata tagacaattt actggaacga 1801 acttttatgt ggtcacatta catctctcca cctcttgcac tgttgtcttg tttcactgat 1861 cttagcttta aacacaagag aagtctttaa aaagcctgca ttgtgtatta aacaccaggt 1921 aatatgtgca aaaccgaggg ctccagtaac accttctaac ctgtgaattg gcagaaaagg 1981 gtagcggtat catgtatatt aaaattggct aatattaagt tattgcagat accacattca 2041 ttatgctgca gtactgtaca tatttttctt agaaattagc tatttgtgca tatcagtatt 2101 tgtaacttta acacattgtt atgtgagaaa tgttactggg gaaatagatc agccactttt 2161 aaggtgctgt catatatctt ggaatgaatg acctaaaatc attttaacca ttgctactgg 2221 aaagtaacag agtcaaaatt ggaaggtttt attcattctt gaatttttcc tttctaaaga 2281 gctcttctat ttatacatgc ctaaattctt ttaaaatgta gagggatacc tgtctgcata 2341 ataaagctga tcatgttttg ctacagtttg caggtgaaaa aaaataaata ttataaaata 2401 tgctattgtt tttgtgttct tgctgcaatg cctttaccaa agtggcctta aatatgagta 2461 gtgaattgag aacatcttga attcttaaaa gacttcttag tgacttttta taaaaaggcc 2521 atgtagaaaa tttattaaaa ctactatgac tgctacattc aggaatatgc cagtggtaaa 2581 gcatttaaat gtagcttgtc agatttacca taatcctact aatttctttg cagcttatta 2641 attttgtgaa atttgtatat atgaagaatt tgcatgtatg tgtatttaca aatttttcta 2701 agtatcttga attctcagac tgcaaaaggc ctattttaac tattgatttt tttttaaaaa 2761 aattgtcttt gaatgtattg gaagtagaca tgcattaact gtgacattat tgcacctcag 2821 tttttttctt tctttttttg ggcaaactga tattatctat aggatatttg tttatgtttg 2881 ttttttgggg gaaagaaact ggaactcagt gttaccttaa agttacggaa tactttgttt 2941 taaaggaaaa gataataagt ttagttatat ctttttgtta atattcaaat gaacttgttt 3001 aagtatctat gtacagtaat gcctcattca tctagaggta atctggcagt cttgtgaaaa 3061 ccgaacacaa ctcagaaact tggaatcgtt tttttttaaa aatgcctctg agcaacccat 3121 ataagtcaca aagtctgtgt gttagagctt atgcatttgt ttttatgaga gattttaata 3181 aatttaatta tttgcttgtc cagactatag catattagct gtttagaagg gatggcttga 3241 aaggaaggag actgaaaaac actctgagag catacactgt ccaaggccat tagtgtaagg 3301 accgctaccc agcctagagg acatcactat actacatcat ctgatgatta ttctttatta 3361 tgcctctagg taattaagta aaggtgaaat tgcatacaca gatatgtagt acatatttta 3421 aaagttttat cttaaattga ttaaaacttt ttaaaaagct ttggtattaa aagaggtaaa 3481 catcagtttc ctcaaacatt ttattcatgt tgaatgcctt tttgcaatga tgactgagtt 3541 gttatcatag tattttaaaa cctgtatagt gttttagact tgttaaaaca ttgctgtcta 3601 gtgtacatct agctaaaagt gtggtttatc taaaccgttt taataagcaa gatgactggg 3661 aaatctctgc cccttttctg agcagtatgc ctcttctttt agaattaaat gaatgctgca 3721 caggtccaga tgtgtgttga tgtagacttg aaatgtctcc acattttgga ggacttcctc 3781 agcccttttc attgagggaa aatatatttg aatttctgtt ttagattgta tcgggtccca 3841 gttgattcat gtgtacaaag ttatgctacc taattacaga ccattaccca aataccaaaa 3901 aaaaaaaaaa aa //