LOCUS BC030268 3745 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens chondroitin sulfate N-acetylgalactosaminyltransferase 2, mRNA (cDNA clone MGC:40204 IMAGE:5223190), complete cds. ACCESSION BC030268 VERSION BC030268.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3745) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3745) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 62 Row: l Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24429591. FEATURES Location/Qualifiers source 1..3745 /db_xref="H-InvDB:HIT000041007" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:40204 IMAGE:5223190" /tissue_type="Pancreas, Spleen, adult pooled" /clone_lib="NIH_MGC_120" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3745 /gene="CSGALNACT2" /gene_synonym="CSGalNAcT-2" /gene_synonym="GALNACT-2" /gene_synonym="GALNACT2" /gene_synonym="PRO0082" /db_xref="GeneID:55454" /db_xref="HGNC:HGNC:24292" CDS 336..1964 /gene="CSGALNACT2" /gene_synonym="CSGalNAcT-2" /gene_synonym="GALNACT-2" /gene_synonym="GALNACT2" /gene_synonym="PRO0082" /codon_start=1 /product="chondroitin sulfate N-acetylgalactosaminyltransferase 2" /protein_id="AAH30268.1" /db_xref="GeneID:55454" /db_xref="HGNC:HGNC:24292" /translation="MPRRGLILHTRTHWLLLGLALLCSLVLFMYLLECAPQTDGNASL PGVVGENYGKEYYQALLQEQEEHYQTRATSLKRQIAQLKQELQEMSEKMRSLQERRNV GANGIGYQSNKEQAPSDLLEFLHSQIDKAEVSIGAKLPSEYGVIPFESFTLMKVFQLE MGLTRHPEEKPVRKDKRDELVEVIEAGLEVINNPDEDDEQEDEEGPLGEKLIFNENDF VEGYYRTERDKGTQYELFFKKADLTEYRHVTLFRPFGPLMKVKSEMIDITRSIINIIV PLAERTEAFVQFMQNFRDVCIHQDKKIHLTVVYFGKEGLSKVKSILESVTSESNFHNY TLVSLNEEFNRGRGLNVGARAWDKGEVLMFFCDVDIYFSAEFLNSCRLNAEPGKKVFY PVVFSLYNPAIVYANQEVPPPVEQQLVHKKDSGFWRDFGFGMTCQYRSDFLTIGGFDM EVKGWGGEDVHLYRKYLHGDLIVIRTPVPGLFHLWHEKRCADELTPEQYRMCIQSKAM NEASHSHLGMLVFREEIETHLHKQAYRTNSEAVG" BASE COUNT 1173 a 631 c 793 g 1148 t ORIGIN 1 cggcggcggg cccaaggcgt gaggcgccgc ccgggtgtcc ccgcggcgca ggaggcggtg 61 gagcgcagag cgggcgagcg cgaaaaatca ctaccaatat aatggatttt atatatcaga 121 ttgctttatt ctggatatca tggtaacaat acagaaagta tacataattt cccatttctg 181 caagtagtca tgactgctga agaaagaaaa acttaaagct acggcagaat tattttatgg 241 aaattctgat tttgttttta atttttgata actttttact aaaggtatga acacacaaag 301 agcttatttt gttaggcaaa tacacattaa taagaatgcc tagaagagga ctgattcttc 361 acacccggac ccactggttg ctgttgggcc ttgctttgct ctgcagtttg gtattattta 421 tgtacctcct ggaatgtgcc ccccagactg atggaaatgc atctcttcct ggtgttgttg 481 gggaaaatta tggtaaagag tattatcaag ccctcctaca ggaacaagaa gaacattatc 541 agaccagggc aaccagtctg aaacgccaaa ttgcccaact aaaacaagaa ttacaagaaa 601 tgagtgagaa gatgcggtca ctgcaagaaa gaaggaatgt aggggctaat ggcataggct 661 atcagagcaa caaagagcaa gcacctagtg atcttttaga gtttcttcat tcccaaattg 721 acaaagctga agttagcata ggggccaaac tacccagtga gtatggggtc attccctttg 781 aaagttttac cttaatgaaa gtatttcaat tggaaatggg tctcactcgc catcctgaag 841 aaaagccagt tagaaaagac aaacgagatg aattggtgga agttattgaa gcgggcttgg 901 aggtcattaa taatcctgat gaagatgatg aacaagaaga tgaggagggt ccccttggag 961 agaaactgat atttaatgaa aatgacttcg tagaaggtta ttatcgcact gagagagata 1021 agggcacaca gtatgaactc ttttttaaga aagcagacct tacggaatat agacatgtga 1081 ccctcttccg cccttttgga cctctcatga aagtgaagag tgagatgatt gacatcacta 1141 gatcaattat taatatcatt gtgccacttg ctgaaagaac tgaagcattt gtacaattta 1201 tgcagaactt cagggatgtt tgtattcatc aagacaagaa gattcatctc acagtggtgt 1261 attttggtaa agaaggactg tctaaagtca agtctatcct agaatctgtc accagtgagt 1321 ctaattttca caattacacc ttggtctcat tgaatgaaga atttaatcgt ggacgaggac 1381 taaatgtggg tgcccgagct tgggacaagg gagaggtctt gatgtttttc tgtgatgttg 1441 atatctattt ctcagccgaa ttccttaaca gctgccggtt aaatgctgag ccaggtaaga 1501 aggtgtttta ccctgtggtg ttcagtcttt acaatcctgc cattgtttat gccaaccagg 1561 aagtgccacc acctgtggag cagcagctgg ttcacaaaaa ggattctggc ttttggcgag 1621 attttggctt tggaatgact tgtcagtatc gttcagattt cctgaccatt ggtggatttg 1681 acatggaagt gaaaggttgg ggtggagaag atgttcatct ttatcgaaaa tacttacatg 1741 gtgacctcat tgtgattcgg actccggttc ctggtctttt ccacctctgg catgaaaagc 1801 gctgtgctga tgagctgacc cccgagcagt accgcatgtg catccagtct aaagccatga 1861 atgaggcctc tcactcccac ctgggaatgc tggtcttcag ggaggaaata gagacgcatc 1921 ttcataaaca ggcatacagg acaaacagtg aagctgttgg ttgaaatcat aattaatgcg 1981 ttactgtatg aaccacaaaa cagcactatt tatttagcct tacttctact tccagatgca 2041 gtgcctcttt tggagaagac atgtttattt ttcatgttct ttctgacatt actttagcaa 2101 ttcaacttga tgtgagaaga aaaaacaaat gtttcaacac aaaatctctg ttttgtgaga 2161 atactgcact atggaataat tgacaaattg aaatctcata tttgtcccaa aagttgtttt 2221 gagttagttc tacctggtgc ccatgttctg attgtgtgtg ggattgcatg gtgtcctgat 2281 tgcatctagg tggagcggat ggaatgtgct gggccactgt tgggtggaga gcagcacatt 2341 cttacagagg agatggagcg ttatgagcat agtatgtgga taggtatctt cacctgcccg 2401 cccctgagtc agcctccttg acttgatagc ttgaagaatc cttttccact gaaatagagg 2461 ataattaatt gacacatctg aaatccccaa tcaatcaatc aagagaaagg tagaactaaa 2521 aactccttaa cttactgttg cttacacccc tgaaagtctg tttttaagca aatgggtaat 2581 agtagaaaat aggttagaat ctatggcttg attaaaaata tgttattaca ttatcatgtt 2641 caggattagg attagtagtc agttgctgta aactattttg aacaaacaga aaagaacacg 2701 gaaacatttt taacagagca tttaattatg ttggaataca ggatcctagc tctgtctggg 2761 aacattagtt tatgtgagcc agctctatca gggtcttccc atggtggttc agaatagatg 2821 agcatagcat ggttttgttt gtttttgctt tcaattttct aatttggcat ggatccatat 2881 gtatttacta tcctttttct aatatattaa tatatgctac atttgtattt gcattactat 2941 aatactttga gttgaaaaag agtttcattg tggagagaaa aagcaaatgg tatgccacaa 3001 gatcactctg atttgagaaa agggaggagg ggaagatagt ctgaatggaa atctgaaata 3061 cggaatgttt tagagaaata tgtcacttgc atatagaatg ttttaattga ggtataaatt 3121 aatgagacaa agtgaaaaag aaattatatt cagataggac tgcactacat tatttgtcac 3181 acatggatct gttaccatca ggtcaattcc tagtatgcat aaatttttta acccttttaa 3241 aagagaccta tgttgaaaac ccctgaaaat tcactgaaga aaaatcatta ctctttttct 3301 cagtaaatca tatcatctga aatattacaa atttcaaatt tctaggtgct atattaattc 3361 aatattacaa taactcttac ctaattattc ttacaagttt taagttgtgg tagtttagtg 3421 atttttttaa aagatgtgtg aaatgttctc tgcaaaataa ttcaggccac tgtctccttt 3481 tatatattat tataattatt tattatgaag accagtgaat tacgatattt aaagtgagag 3541 aacttaatta tttgcaaagg taagttacag cttgtttttt gagagaatca aatgagttta 3601 cttttgttcc tgttgttttt aactagcttt aagtttaaag atggaagcta agcaatggaa 3661 atgctatacg tttttgacat ttattaaatg gtaccaataa agtattttat taccaaaagt 3721 taaaaaaaaa aaaaaaaaaa aaaaa //