LOCUS BC030158 1734 bp mRNA linear HUM 05-NOV-2003 DEFINITION Homo sapiens bromodomain containing 4, mRNA (cDNA clone IMAGE:5086929), partial cds. ACCESSION BC030158 VERSION BC030158.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1734) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1734) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC030158.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CGAP (Stanford) cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 39 Row: n Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7657217. FEATURES Location/Qualifiers source 1..1734 /db_xref="H-InvDB:HIT000092068" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5086929" /tissue_type="Liver, hepatocellular carcinoma" /clone_lib="NIH_MGC_100" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..>1734 /gene="BRD4" /gene_synonym="CAP" /gene_synonym="HUNKI" /gene_synonym="MCAP" /db_xref="GeneID:23476" CDS 90..>1734 /gene="BRD4" /gene_synonym="CAP" /gene_synonym="HUNKI" /gene_synonym="MCAP" /codon_start=1 /product="BRD4 protein" /protein_id="AAH30158.1" /db_xref="GeneID:23476" /translation="MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTN PPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIK TPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK INELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPV QATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIA ATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKD VPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCD IIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVF EMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERA QRLAELQEQLKAVHEQLAALSQPQQNKPKKKKKKKKKKKK" misc_feature 255..584 /gene="BRD4" /gene_synonym="CAP" /gene_synonym="HUNKI" /gene_synonym="MCAP" /note="BROMO; Region: bromo domain" /db_xref="CDD:smart00297" misc_feature 1143..1460 /gene="BRD4" /gene_synonym="CAP" /gene_synonym="HUNKI" /gene_synonym="MCAP" /note="BROMO; Region: bromo domain" /db_xref="CDD:smart00297" BASE COUNT 485 a 554 c 432 g 263 t ORIGIN 1 ggaggaggag gaggaggaag cggccgccgc ggggtccgcg gcgcgcccgg cccggagtgc 61 ctggtgaaga atgtgatggg atcactagca tgtctgcgga gagcggccct gggacgagat 121 tgagaaatct gccagtaatg ggggatggac tagaaacttc ccaaatgtct acaacacagg 181 cccaggccca accccagcca gccaacgcag ccagcaccaa ccccccgccc ccagagacct 241 ccaaccctaa caagcccaag aggcagacca accaactgca atacctgctc agagtggtgc 301 tcaagacact atggaaacac cagtttgcat ggcctttcca gcagcctgtg gatgccgtca 361 agctgaacct ccctgattac tataagatca ttaaaacgcc tatggatatg ggaacaataa 421 agaagcgctt ggaaaacaac tattactgga atgctcagga atgtatccag gacttcaaca 481 ctatgtttac aaattgttac atctacaaca agcctggaga tgacatagtc ttaatggcag 541 aagctctgga aaagctcttc ttgcaaaaaa taaatgagct acccacagaa gaaaccgaga 601 tcatgatagt ccaggcaaaa ggaagaggac gtgggaggaa agaaacaggg acagcaaaac 661 ctggcgtttc cacggtacca aacacaactc aagcatcgac tcctccgcag acccagaccc 721 ctcagccgaa tcctcctcct gtgcaggcca cgcctcaccc cttccctgcc gtcaccccgg 781 acctcatcgt ccagacccct gtcatgacag tggtgcctcc ccagccactg cagacgcccc 841 cgccagtgcc cccccagcca caacccccac ccgctccagc tccccagccc gtacagagcc 901 acccacccat catcgcggcc accccacagc ctgtgaagac aaagaaggga gtgaagagga 961 aagcagacac caccaccccc accaccattg accccattca cgagccaccc tcgctgcccc 1021 cggagcccaa gaccaccaag ctgggccagc ggcgggagag cagccggcct gtgaaacctc 1081 caaagaagga cgtgcccgac tctcagcagc acccagcacc agagaagagc agcaaggtct 1141 cggagcagct caagtgctgc agcggcatcc tcaaggagat gtttgccaag aagcacgccg 1201 cctacgcctg gcccttctac aagcctgtgg acgtggaggc actgggccta cacgactact 1261 gtgacatcat caagcacccc atggacatga gcacaatcaa gtctaaactg gaggcccgtg 1321 agtaccgtga tgctcaggag tttggtgctg acgtccgatt gatgttctcc aactgctata 1381 agtacaaccc tcctgaccat gaggtggtgg ccatggcccg caagctccag gatgtgttcg 1441 aaatgcgctt tgccaagatg ccggacgagc ctgaggagcc agtggtggcc gtgtcctccc 1501 cggcagtgcc ccctcccacc aaggttgtgg ccccgccctc atccagcgac agcagcagcg 1561 atagctcctc ggacagtgac agttcgactg atgactctga ggaggagcga gcccagcggc 1621 tggctgagct ccaggagcag ctcaaagccg tgcacgagca gcttgcagcc ctctctcagc 1681 cccagcagaa caaaccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //