LOCUS BC030158 1734 bp mRNA linear HUM 05-NOV-2003
DEFINITION Homo sapiens bromodomain containing 4, mRNA (cDNA clone
IMAGE:5086929), partial cds.
ACCESSION BC030158
VERSION BC030158.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1734)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC030158.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CGAP (Stanford)
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657217.
FEATURES Location/Qualifiers
source 1..1734
/db_xref="H-InvDB:HIT000092068"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5086929"
/tissue_type="Liver, hepatocellular carcinoma"
/clone_lib="NIH_MGC_100"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..>1734
/gene="BRD4"
/gene_synonym="CAP"
/gene_synonym="HUNKI"
/gene_synonym="MCAP"
/db_xref="GeneID:23476"
CDS 90..>1734
/gene="BRD4"
/gene_synonym="CAP"
/gene_synonym="HUNKI"
/gene_synonym="MCAP"
/codon_start=1
/product="BRD4 protein"
/protein_id="AAH30158.1"
/db_xref="GeneID:23476"
/translation="MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTN
PPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIK
TPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK
INELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPV
QATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIA
ATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKD
VPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCD
IIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVF
EMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERA
QRLAELQEQLKAVHEQLAALSQPQQNKPKKKKKKKKKKKK"
misc_feature 255..584
/gene="BRD4"
/gene_synonym="CAP"
/gene_synonym="HUNKI"
/gene_synonym="MCAP"
/note="BROMO; Region: bromo domain"
/db_xref="CDD:smart00297"
misc_feature 1143..1460
/gene="BRD4"
/gene_synonym="CAP"
/gene_synonym="HUNKI"
/gene_synonym="MCAP"
/note="BROMO; Region: bromo domain"
/db_xref="CDD:smart00297"
BASE COUNT 485 a 554 c 432 g 263 t
ORIGIN
1 ggaggaggag gaggaggaag cggccgccgc ggggtccgcg gcgcgcccgg cccggagtgc
61 ctggtgaaga atgtgatggg atcactagca tgtctgcgga gagcggccct gggacgagat
121 tgagaaatct gccagtaatg ggggatggac tagaaacttc ccaaatgtct acaacacagg
181 cccaggccca accccagcca gccaacgcag ccagcaccaa ccccccgccc ccagagacct
241 ccaaccctaa caagcccaag aggcagacca accaactgca atacctgctc agagtggtgc
301 tcaagacact atggaaacac cagtttgcat ggcctttcca gcagcctgtg gatgccgtca
361 agctgaacct ccctgattac tataagatca ttaaaacgcc tatggatatg ggaacaataa
421 agaagcgctt ggaaaacaac tattactgga atgctcagga atgtatccag gacttcaaca
481 ctatgtttac aaattgttac atctacaaca agcctggaga tgacatagtc ttaatggcag
541 aagctctgga aaagctcttc ttgcaaaaaa taaatgagct acccacagaa gaaaccgaga
601 tcatgatagt ccaggcaaaa ggaagaggac gtgggaggaa agaaacaggg acagcaaaac
661 ctggcgtttc cacggtacca aacacaactc aagcatcgac tcctccgcag acccagaccc
721 ctcagccgaa tcctcctcct gtgcaggcca cgcctcaccc cttccctgcc gtcaccccgg
781 acctcatcgt ccagacccct gtcatgacag tggtgcctcc ccagccactg cagacgcccc
841 cgccagtgcc cccccagcca caacccccac ccgctccagc tccccagccc gtacagagcc
901 acccacccat catcgcggcc accccacagc ctgtgaagac aaagaaggga gtgaagagga
961 aagcagacac caccaccccc accaccattg accccattca cgagccaccc tcgctgcccc
1021 cggagcccaa gaccaccaag ctgggccagc ggcgggagag cagccggcct gtgaaacctc
1081 caaagaagga cgtgcccgac tctcagcagc acccagcacc agagaagagc agcaaggtct
1141 cggagcagct caagtgctgc agcggcatcc tcaaggagat gtttgccaag aagcacgccg
1201 cctacgcctg gcccttctac aagcctgtgg acgtggaggc actgggccta cacgactact
1261 gtgacatcat caagcacccc atggacatga gcacaatcaa gtctaaactg gaggcccgtg
1321 agtaccgtga tgctcaggag tttggtgctg acgtccgatt gatgttctcc aactgctata
1381 agtacaaccc tcctgaccat gaggtggtgg ccatggcccg caagctccag gatgtgttcg
1441 aaatgcgctt tgccaagatg ccggacgagc ctgaggagcc agtggtggcc gtgtcctccc
1501 cggcagtgcc ccctcccacc aaggttgtgg ccccgccctc atccagcgac agcagcagcg
1561 atagctcctc ggacagtgac agttcgactg atgactctga ggaggagcga gcccagcggc
1621 tggctgagct ccaggagcag ctcaaagccg tgcacgagca gcttgcagcc ctctctcagc
1681 cccagcagaa caaaccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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