LOCUS BC029641 1664 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens farnesyl-diphosphate farnesyltransferase 1, mRNA (cDNA clone MGC:25135 IMAGE:4514761), complete cds. ACCESSION BC029641 VERSION BC029641.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1664) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1664) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAY-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 29 Row: h Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1664 /db_xref="H-InvDB:HIT000040851" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:25135 IMAGE:4514761" /tissue_type="Bladder, transitional cell papilloma" /clone_lib="NIH_MGC_93" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1664 /gene="FDFT1" /gene_synonym="DGPT" /gene_synonym="ERG9" /gene_synonym="SQS" /gene_synonym="SS" /db_xref="GeneID:2222" /db_xref="HGNC:HGNC:3629" /db_xref="MIM:184420" CDS 33..1286 /gene="FDFT1" /gene_synonym="DGPT" /gene_synonym="ERG9" /gene_synonym="SQS" /gene_synonym="SS" /codon_start=1 /product="farnesyl-diphosphate farnesyltransferase 1" /protein_id="AAH29641.1" /db_xref="GeneID:2222" /db_xref="HGNC:HGNC:3629" /db_xref="MIM:184420" /translation="MEFVKCLGHPEEFYNLVRFRIGGKRKVMPKMDQDSLSSSLKTCY KYLNQTSRSFAAVIQALDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHS FLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDK HVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIR DYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIPDVITY LSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAV KAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVML LAALSWQYLTTLSQVTEDYVQTGEH" BASE COUNT 450 a 386 c 409 g 419 t ORIGIN 1 gtcgcgcccg ggagtccgcc gcctgcgcca ggatggagtt cgtgaaatgc cttggccacc 61 ccgaagagtt ctacaacctg gtgcgcttcc ggatcggggg caagcggaag gtgatgccca 121 agatggacca ggactcgctc agcagcagcc tgaaaacttg ctacaagtat ctcaatcaga 181 ccagtcgcag tttcgcagct gttatccagg cgctggatgg ggaaatgcgc aacgcagtgt 241 gcatatttta tctggttctc cgagctctgg acacactgga agatgacatg accatcagtg 301 tggaaaagaa ggtcccgctg ttacacaact ttcactcttt cctttaccaa ccagactggc 361 ggttcatgga gagcaaggag aaggatcgcc aggtgctgga ggacttccca acgatctccc 421 ttgagtttag aaatctggct gagaaatacc aaacagtgat tgccgacatt tgccggagaa 481 tgggcattgg gatggcagag tttttggata agcatgtgac ctctgaacag gagtgggaca 541 agtactgcca ctatgttgct gggctggtcg gaattggcct ttcccgtctt ttctcagcct 601 cagagtttga agacccctta gttggtgaag atacagaacg tgccaactct atgggcctgt 661 ttctgcagaa aacaaacatc atccgtgact atctggaaga ccagcaagga ggaagagagt 721 tctggcctca agaggtttgg agcaggtatg ttaagaagtt aggggatttt gctaagccgg 781 agaatattga cttggccgtg cagtgcctga atgaacttat aaccaatgca ctgcaccaca 841 tcccagatgt catcacctac ctttcgagac tcagaaacca gagtgtgttt aacttctgtg 901 ctattccaca ggtgatggcc attgccactt tggctgcctg ttataataac cagcaggtgt 961 tcaaaggggc agtgaagatt cggaaagggc aagcagtgac cctgatgatg gatgccacca 1021 atatgccagc tgtcaaagcc atcatatatc agtatatgga agagatttat catagaatcc 1081 ccgactcaga cccatcttct agcaaaacaa ggcagatcat ctccaccatc cggacgcaga 1141 atcttcccaa ctgtcagctg atttcccgaa gccactactc ccccatctac ctgtcgtttg 1201 tcatgctttt ggctgccctg agctggcagt acctgaccac tctctcccag gtaacagaag 1261 actatgttca gactggagaa cactgatccc aaatttgtcc atagctgaag tccaccataa 1321 agtggattta ctttttttct ttaaggatgg atgttgtgtt ctctttattt ttttcctact 1381 actttaatcc ctaaaagaac gctgtgtggc tgggaccttt aggaaagtga aatgcaggtg 1441 agaagaacct aaacatgaaa ggaaagggtg cctcatccca gcaacctgtc cttgtgggtg 1501 atgatcactg tgctgcttgc ggctcatggc agagcattca gtgccacggt ttaggtgaag 1561 tcgctgcata tgtgtctgtc atgagatcct acttagtatg atcctggcta gaatgataat 1621 taaaagtatt taattttgaa aaaaaaaaaa aaaaaaaaaa aaaa //