LOCUS BC028703 1872 bp mRNA linear HUM 20-JUL-2007 DEFINITION Homo sapiens LAG1 homolog, ceramide synthase 3, mRNA (cDNA clone MGC:26920 IMAGE:4837657), complete cds. ACCESSION BC028703 VERSION BC028703.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1872) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1872) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 34 Row: m Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31341477. FEATURES Location/Qualifiers source 1..1872 /db_xref="H-InvDB:HIT000050955" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26920 IMAGE:4837657" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1872 /gene="LASS3" /gene_synonym="CerS3" /db_xref="GeneID:204219" /db_xref="HGNC:HGNC:23752" CDS 506..1657 /gene="LASS3" /gene_synonym="CerS3" /codon_start=1 /product="LASS3 protein" /protein_id="AAH28703.1" /db_xref="GeneID:204219" /db_xref="HGNC:HGNC:23752" /translation="MFWTFKEWFWLERFWLPPTIKWSDLEDHDGLVFVKPSHLYVTIP YAFLLLIIRRVFEKFVASPLAKSFGIKETVRKVTPNTVLENFFKHSTRQPLQTDIYGL AKKCNLTERQVERWFRSRRNQERPSRLKKFQEACWRFAFYLMITVAGIAFLYDKPWLY DLWEVWNGYPKQPLLPSQYWYYILEMSFYWSLLFRLGFDVKRKDFLAHIIHHLAAISL MSFSWCANYIRSGTLVMIVHDVADIWLESAKMFSYAGWTQTCNTLFFIFSTIFFISRL IVFPFWILYCTLILPMYHLEPFFSYIFLNLQLMILQVLHRYWGYYILKMLNRCIFMKS IQDVRSDDEDYEEEEEEEEEEATKGKEMDCLKNGLGAERHLIPNGQHGH" BASE COUNT 496 a 403 c 427 g 546 t ORIGIN 1 agcggccttg caaagtccgt taggagcgct ccagggctac agtgcccagc ggttaacaag 61 tttgtaatta ctttcgtggg tttctacgtt gcaaattgag aagagggttg ctgggttggg 121 cccccctcct ctggacgcta accccaccca ggtggtgaaa caggaagcaa catcccatca 181 ggaagaacct gagggtgcca tccagtagct tcgcctcacg tcactgactg ccgtcagtca 241 gaaatcttga ctcgcaactt tggagggtgg gtctctgaag gaatttcagg tcttacacag 301 agatgagttg tgctgctctc tgaggagaac gaagctggtt ggaacgttgg aagctgctct 361 ctgactacac ttcacaagca aggggcacct tttgtggact gacatttcag aaagggatgt 421 tgtgaaacaa aagctgacat ttatatatat atacatatat acagtatttg agttcctcag 481 tagaaagcta tcatatatac tcagaatgtt ttggacgttt aaagaatggt tctggttgga 541 aagattctgg cttcctccaa caataaagtg gtcagatctt gaggatcacg atggactcgt 601 ctttgtaaaa ccttctcatt tatacgtgac aattccatat gcttttctct tgctgattat 661 caggcgtgta tttgaaaaat ttgttgcttc acctctagca aaatcatttg gcattaaaga 721 gacagttcga aaggttacac caaatactgt cttagagaat tttttcaaac attccacaag 781 gcaaccattg caaactgata tttatggact ggcaaagaag tgtaacttga cggagcgcca 841 ggtggaaaga tggtttagga gtcggcggaa tcaagagagg ccttccaggc tgaagaaatt 901 ccaggaagct tgctggagat ttgcatttta cttaatgatc actgttgctg gaattgcgtt 961 tctttatgat aaaccttggc tatatgactt atgggaggtt tggaatggct atcccaaaca 1021 gcccctgctg ccatcgcagt actggtacta cattttagaa atgagttttt attggtctct 1081 gttatttaga cttggctttg atgtcaagag aaaggatttt ctagctcata tcatccacca 1141 cctggctgct attagtctga tgagcttctc ttggtgtgct aattatattc gcagtgggac 1201 cctcgtgatg attgtacacg atgtggctga catttggctg gagtctgcta agatgttttc 1261 ttatgctgga tggacgcaga cctgtaacac cctgtttttc atcttctcca ccatattttt 1321 catcagccgc ctcattgttt ttcctttctg gattttatat tgcacgctga tcttgcctat 1381 gtatcacctc gagcctttct tttcatacat cttcctcaac ctacagctca tgatcttgca 1441 ggtccttcac cgttactggg gttattacat cttgaagatg ctcaacagat gtatattcat 1501 gaagagcatc caggatgtga ggagtgatga cgaggattat gaagaggaag aggaagagga 1561 agaagaagag gctaccaaag gcaaagagat ggattgttta aagaacggcc tcggggctga 1621 gaggcacctc attcccaatg gccagcatgg ccattagctg gaagcctaca ggactcccat 1681 ggcacagcat gctgcaagta ctgttggcag cctggcttca ggccccacac agaccccaca 1741 ttctgccctt ccctctttct caccaccgcc ttccctccca cctaagatgt gtttaccaaa 1801 atgttgttaa cttgtgttaa aatgttaaat ataagcatgc ccatggattt ttactgcaaa 1861 aaaaaaaaaa aa //