LOCUS BC028703 1872 bp mRNA linear HUM 20-JUL-2007
DEFINITION Homo sapiens LAG1 homolog, ceramide synthase 3, mRNA (cDNA clone
MGC:26920 IMAGE:4837657), complete cds.
ACCESSION BC028703
VERSION BC028703.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1872)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1872)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341477.
FEATURES Location/Qualifiers
source 1..1872
/db_xref="H-InvDB:HIT000050955"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26920 IMAGE:4837657"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1872
/gene="LASS3"
/gene_synonym="CerS3"
/db_xref="GeneID:204219"
/db_xref="HGNC:HGNC:23752"
CDS 506..1657
/gene="LASS3"
/gene_synonym="CerS3"
/codon_start=1
/product="LASS3 protein"
/protein_id="AAH28703.1"
/db_xref="GeneID:204219"
/db_xref="HGNC:HGNC:23752"
/translation="MFWTFKEWFWLERFWLPPTIKWSDLEDHDGLVFVKPSHLYVTIP
YAFLLLIIRRVFEKFVASPLAKSFGIKETVRKVTPNTVLENFFKHSTRQPLQTDIYGL
AKKCNLTERQVERWFRSRRNQERPSRLKKFQEACWRFAFYLMITVAGIAFLYDKPWLY
DLWEVWNGYPKQPLLPSQYWYYILEMSFYWSLLFRLGFDVKRKDFLAHIIHHLAAISL
MSFSWCANYIRSGTLVMIVHDVADIWLESAKMFSYAGWTQTCNTLFFIFSTIFFISRL
IVFPFWILYCTLILPMYHLEPFFSYIFLNLQLMILQVLHRYWGYYILKMLNRCIFMKS
IQDVRSDDEDYEEEEEEEEEEATKGKEMDCLKNGLGAERHLIPNGQHGH"
BASE COUNT 496 a 403 c 427 g 546 t
ORIGIN
1 agcggccttg caaagtccgt taggagcgct ccagggctac agtgcccagc ggttaacaag
61 tttgtaatta ctttcgtggg tttctacgtt gcaaattgag aagagggttg ctgggttggg
121 cccccctcct ctggacgcta accccaccca ggtggtgaaa caggaagcaa catcccatca
181 ggaagaacct gagggtgcca tccagtagct tcgcctcacg tcactgactg ccgtcagtca
241 gaaatcttga ctcgcaactt tggagggtgg gtctctgaag gaatttcagg tcttacacag
301 agatgagttg tgctgctctc tgaggagaac gaagctggtt ggaacgttgg aagctgctct
361 ctgactacac ttcacaagca aggggcacct tttgtggact gacatttcag aaagggatgt
421 tgtgaaacaa aagctgacat ttatatatat atacatatat acagtatttg agttcctcag
481 tagaaagcta tcatatatac tcagaatgtt ttggacgttt aaagaatggt tctggttgga
541 aagattctgg cttcctccaa caataaagtg gtcagatctt gaggatcacg atggactcgt
601 ctttgtaaaa ccttctcatt tatacgtgac aattccatat gcttttctct tgctgattat
661 caggcgtgta tttgaaaaat ttgttgcttc acctctagca aaatcatttg gcattaaaga
721 gacagttcga aaggttacac caaatactgt cttagagaat tttttcaaac attccacaag
781 gcaaccattg caaactgata tttatggact ggcaaagaag tgtaacttga cggagcgcca
841 ggtggaaaga tggtttagga gtcggcggaa tcaagagagg ccttccaggc tgaagaaatt
901 ccaggaagct tgctggagat ttgcatttta cttaatgatc actgttgctg gaattgcgtt
961 tctttatgat aaaccttggc tatatgactt atgggaggtt tggaatggct atcccaaaca
1021 gcccctgctg ccatcgcagt actggtacta cattttagaa atgagttttt attggtctct
1081 gttatttaga cttggctttg atgtcaagag aaaggatttt ctagctcata tcatccacca
1141 cctggctgct attagtctga tgagcttctc ttggtgtgct aattatattc gcagtgggac
1201 cctcgtgatg attgtacacg atgtggctga catttggctg gagtctgcta agatgttttc
1261 ttatgctgga tggacgcaga cctgtaacac cctgtttttc atcttctcca ccatattttt
1321 catcagccgc ctcattgttt ttcctttctg gattttatat tgcacgctga tcttgcctat
1381 gtatcacctc gagcctttct tttcatacat cttcctcaac ctacagctca tgatcttgca
1441 ggtccttcac cgttactggg gttattacat cttgaagatg ctcaacagat gtatattcat
1501 gaagagcatc caggatgtga ggagtgatga cgaggattat gaagaggaag aggaagagga
1561 agaagaagag gctaccaaag gcaaagagat ggattgttta aagaacggcc tcggggctga
1621 gaggcacctc attcccaatg gccagcatgg ccattagctg gaagcctaca ggactcccat
1681 ggcacagcat gctgcaagta ctgttggcag cctggcttca ggccccacac agaccccaca
1741 ttctgccctt ccctctttct caccaccgcc ttccctccca cctaagatgt gtttaccaaa
1801 atgttgttaa cttgtgttaa aatgttaaat ataagcatgc ccatggattt ttactgcaaa
1861 aaaaaaaaaa aa
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