LOCUS BC027911 2453 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens jumonji domain containing 5, mRNA (cDNA clone MGC:34163 IMAGE:5207043), complete cds. ACCESSION BC027911 VERSION BC027911.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2453) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2453) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 49 Row: h Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13376122. FEATURES Location/Qualifiers source 1..2453 /db_xref="H-InvDB:HIT000040348" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34163 IMAGE:5207043" /tissue_type="Lung, Spleen, fetal, pooled" /clone_lib="NIH_MGC_122" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2453 /gene="JMJD5" /gene_synonym="FLJ13798" /db_xref="GeneID:79831" /db_xref="HGNC:HGNC:25840" CDS 162..1412 /gene="JMJD5" /gene_synonym="FLJ13798" /codon_start=1 /product="jumonji domain containing 5" /protein_id="AAH27911.1" /db_xref="GeneID:79831" /db_xref="HGNC:HGNC:25840" /translation="MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERS VVTLLQRATELFYEGRRDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLK ALCLCQAPEDANTVAAALRVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLP EQPCTKKARADHGLIPDVKLEKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCM QKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQH QLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMG RKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEIL FIPVKYWHYVRALDLSFSVSFWWS" BASE COUNT 594 a 687 c 707 g 465 t ORIGIN 1 cgagcggtga gcgatcgata ctcctatgct agcctctggc tcctcagggg acacagccga 61 gtggtcggac caaacgcaac gagtcttcgc cagcccaaag gcgactcgac accgtcccag 121 ctgaagagag gcacgggact gaaccagctg gtggtggccc gatggctgga gacacccact 181 gccccgcaga gcccctggcc agagaaggca ctttatggga ggccctcagg gcgctcctgc 241 cgcacagtaa agaagacctg aagttggacc tcggggagaa agtggagagg agcgtggtga 301 cattgttgca gcgagccact gagctcttct acgagggcag gagggacgag tgtctgcaga 361 gcagcgaggt gatcctggac tactcctggg agaagctcaa cacgggcaca tggcaggacg 421 tagacaaaga ctggcgccgg gtctacgcca tcggctgcct cctgaaagcc ctgtgtctgt 481 gccaggcacc tgaggatgcc aacactgtgg ccgcagccct gcgggtctgt gacatgggcc 541 tgctgatggg ggcagccatc ctgggggaca tccttcttaa agtcgctgcc atcctccaga 601 cacacctccc tggaaagagg cctgcccgtg gctccctccc agagcaaccc tgcacaaaga 661 aagcaagggc ggaccatggt ttgattccag atgtgaagtt agaaaaaaca gtcccccggc 721 tgcaccgtcc gtccctccag catttcaggg agcagttttt ggttccaggg aggcccgtga 781 tcctgaaagg cgtggctgac cactggccgt gcatgcagaa gtggagtttg gagtatatcc 841 aggagatcgc tggctgccga actgtcccag tggaagttgg ttcgaggtac acagatgagg 901 aatggtccca gaccctcatg acggtcaacg agttcatcag caaatacatc gtgaatgagc 961 caagggacgt cgggtacctt gctcagcacc agctctttga ccagatcccg gagttgaagc 1021 aggacatcag catccccgac tactgcagcc tgggcgatgg ggaggaggag gaaatcacca 1081 tcaatgcctg gtttggtccc cagggaacca tctccccact acatcaggat ccccagcaaa 1141 acttcctagt gcaggtgatg gggaggaagt acatccggct gtattccccg caggagtcag 1201 gggctctgta ccctcatgac acgcaccttc tccataacac gagccaggtt gacgtggaga 1261 atcccgacct ggaaaagttc cccaagtttg ccaaggcccc attcctgtcc tgcatcctgt 1321 ctcctggaga gatcctgttc atcccggtga aatactggca ttacgtgcgg gctctggatt 1381 tgagcttctc ggtcagcttc tggtggtcgt agccaggata ggagctgaaa gggcctgaca 1441 tgcagacagc attcatctgt tcactaattt cctgggtcct ggaatctata gagacaagca 1501 ggactgaacc tgtgtcctga agagccttca ctgcccagtg gcagccctgg ggggctgagc 1561 tccagcactg gacaggcaca gagcaggggc tgcccaggaa ggagcacact ccaggccagg 1621 ggtgcatggc agaggaaggt ggggagagcc cagaaggaca ttgcagacag acagcctgca 1681 tggggactct ggcatcagaa agccgaatgt ttttgggaaa cgggtgggtc acacaggcag 1741 gggtgaaaca tgggctctga ggttggctac ctgattcaaa cccggccgcg ctgcgcacct 1801 gctgggtgac ttggccagga tcccccactt cgctgtgccc atatggaaaa gagggcaagg 1861 ccagtcctca ctgccgaggg ccgagaaggc ggtgccgagc ccctgctgct gcatgaacct 1921 tagccgctgt cactgatccc aattactctg atccttttgc ccttccttcc cataacggcc 1981 tgctggacgc cacagcctga atactggaga gagctgggca ttgcccaggt cacaggagag 2041 agtccgtaga gacctgcgca ggagccggga cccctgctga gcagtgggag ctttctgtca 2101 tccccatggc tcaaggataa cctacctgcc tgcagagaag agcgaaggtc ttgctggatg 2161 acttttcacc cgcactcacc caggagcagg ctcccaagtg aagaaaccac caaaccatca 2221 ccagctccta gaagcctccc tcccaccacc ttctagtcac catcccccag aagtaatgac 2281 tctcaaacct gggggatttg aggccagggg gagagccagg ctctatgctt tctgtaattg 2341 tgtctcgttt gtgtgcacgc aggtttgttt tatgttttgg ccattaagat tttccccagc 2401 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //