LOCUS BC026262 2161 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens lymphotoxin beta receptor (TNFR superfamily, member 3), mRNA (cDNA clone MGC:22593 IMAGE:4703362), complete cds. ACCESSION BC026262 VERSION BC026262.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2161) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2161) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 37 Row: b Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4505038. FEATURES Location/Qualifiers source 1..2161 /db_xref="H-InvDB:HIT000040166" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22593 IMAGE:4703362" /tissue_type="Lung" /clone_lib="NIH_MGC_77" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..2161 /gene="LTBR" /gene_synonym="CD18" /gene_synonym="LT-BETA-R" /gene_synonym="TNF-R-III" /gene_synonym="TNFCR" /gene_synonym="TNFR-RP" /gene_synonym="TNFR2-RP" /gene_synonym="TNFRSF3" /db_xref="GeneID:4055" /db_xref="HGNC:HGNC:6718" /db_xref="MIM:600979" CDS 199..1506 /gene="LTBR" /gene_synonym="CD18" /gene_synonym="LT-BETA-R" /gene_synonym="TNF-R-III" /gene_synonym="TNFCR" /gene_synonym="TNFR-RP" /gene_synonym="TNFR2-RP" /gene_synonym="TNFRSF3" /codon_start=1 /product="lymphotoxin beta receptor (TNFR superfamily, member 3)" /protein_id="AAH26262.1" /db_xref="GeneID:4055" /db_xref="HGNC:HGNC:6718" /db_xref="MIM:600979" /translation="MLLPWATSAPGLAWGPLVLGLFGLLAASQPQAVPPYASENQTCR DQEKEYYEPQHRICCSRCPPGTYVSAKCSRIRDTVCATCAENSYNEHWNYLTICQLCR PCDPVMGLEEIAPCTSKRKTQCRCQPGMFCAAWALECTHCELLSDCPPGTEAELKDEV GKGNNHCVPCKAGHFQNTSSPSARCQPHTRCENQGLVEAAPGTAQSDTTCKNPLEPLP PEMSGTMLMLAVLLPLAFFLLLATVFSCIWKSHPSLCRKLGSLLKRRPQGEGPNPVAG SWEPPKAHPYFPDLVQPLLPISGDVSPVSTGLPAAPVLEAGVPQQQSPLDLTREPQLE PGEQSQVAHGTNGIHVTGGSMTITGNIYIYNGPVLGGPPGPGDLPATPEPPYPIPEEG DPGPPGLSTPHQEDGKAWHLAETEHCGATPSNRGPRNQFITHD" BASE COUNT 473 a 708 c 606 g 374 t ORIGIN 1 gactcccact tcctgagctc cgccatggga gccctggagg cccggcctgg ccgctcccgg 61 ccctggggtg cacatcggcc ctgagtcccg tcccaggctc tgggctcggg cagccgccgc 121 caccgctgcc caggacgtcg ggcctcctgc cttcctccca ggcccccacg ttgctggccg 181 cctggccgag tggccgccat gctcctgcct tgggccacct ctgcccccgg cctggcctgg 241 gggcctctgg tgctgggcct cttcgggctc ctggcagcat cgcagcccca ggcggtgcct 301 ccatatgcgt cggagaacca gacctgcagg gaccaggaaa aggaatacta tgagccccag 361 caccgcatct gctgctcccg ctgcccgcca ggcacctatg tctcagctaa atgtagccgc 421 atccgggaca cagtttgtgc cacatgtgcc gagaattcct acaacgagca ctggaactac 481 ctgaccatct gccagctgtg ccgcccctgt gacccagtga tgggcctcga ggagattgcc 541 ccctgcacaa gcaaacggaa gacccagtgc cgctgccagc cgggaatgtt ctgtgctgcc 601 tgggccctcg agtgtacaca ctgcgagcta ctttctgact gcccgcctgg cactgaagcc 661 gagctcaaag atgaagttgg gaagggtaac aaccactgcg tcccctgcaa ggccgggcac 721 ttccagaata cctcctcccc cagcgcccgc tgccagcccc acaccaggtg tgagaaccaa 781 ggtctggtgg aggcagctcc aggcactgcc cagtccgaca caacctgcaa aaatccatta 841 gagccactgc ccccagagat gtcaggaacc atgctgatgc tggccgttct gctgccactg 901 gccttctttc tgctccttgc caccgtcttc tcctgcatct ggaagagcca cccttctctc 961 tgcaggaaac tgggatcgct gctcaagagg cgtccgcagg gagagggacc caatcctgta 1021 gctggaagct gggagcctcc gaaggcccat ccatacttcc ctgacttggt acagccactg 1081 ctacccattt ctggagatgt ttccccagta tccactgggc tccccgcagc cccagttttg 1141 gaggcagggg tgccgcaaca gcagagtcct ctggacctga ccagggagcc gcagttggaa 1201 cccggggagc agagccaggt ggcccacggt accaatggca ttcatgtcac cggcgggtct 1261 atgactatca ctggcaacat ctacatctac aatggaccag tactgggggg accaccgggt 1321 cctggagacc tcccagctac ccccgaacct ccatacccca ttcccgaaga gggggaccct 1381 ggccctcccg ggctctctac accccaccag gaagatggca aggcttggca cctagcggag 1441 acagagcact gtggtgccac accctctaac aggggcccaa ggaaccaatt tatcacccat 1501 gactgactga gtctgagaaa aggcagaaga aggggggcac aagggcacct tctcccttga 1561 ggctgccctg cccacgtggg attcacaggg gcctgagtag ggcccgggga agcagagccc 1621 taagggatta aggctcagac acctctgaga gcaggtgggc actggctggg tacggtgccc 1681 tccacaggac tctccctact gcctgagcaa acctgaggcc tcccggcaga cccacccacc 1741 ccctggggct gctcagcctc aggcacggac agggcacatg ataccaactg ctgcccacta 1801 cggcacgccg caccggagca cggcaccgag ggagccgcca cacggtcacc tgcaaggacg 1861 tcacgggccc ctctaaagga ttcgtggtgc tcatccccaa gcttcagaga ccctttgggg 1921 ttccacactt cacgtggact gaggtagacc ctgcatgaag atgaaattat agggaggacg 1981 ctccttccct cccctcctag aggagaggaa agggagtcat taacaactag ggggttgggt 2041 aggattccta ggtatgggga agagttttgg aaggggagga aaatggcaag tgtatttata 2101 ttgtaaccac atgcaaataa aaagaatggg acaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2161 a //