LOCUS BC026257 1722 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens apolipoprotein F, mRNA (cDNA clone MGC:22520 IMAGE:4710467), complete cds. ACCESSION BC026257 VERSION BC026257.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1722) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1722) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 37 Row: c Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50659075. FEATURES Location/Qualifiers source 1..1722 /db_xref="H-InvDB:HIT000040164" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22520 IMAGE:4710467" /tissue_type="Liver" /clone_lib="NIH_MGC_76" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1722 /gene="APOF" /gene_synonym="Apo-F" /gene_synonym="MGC22520" /db_xref="GeneID:319" /db_xref="HGNC:HGNC:615" /db_xref="MIM:107760" CDS 55..1035 /gene="APOF" /gene_synonym="Apo-F" /gene_synonym="MGC22520" /codon_start=1 /product="apolipoprotein F" /protein_id="AAH26257.1" /db_xref="GeneID:319" /db_xref="HGNC:HGNC:615" /db_xref="MIM:107760" /translation="MTGLCGYSAPDMRGLRLIMIPVELLLCYLLLHPVDATSYGKQTN VLMHFPLSLESQTPSSDPLSCQFLHPKSLPGFSHMAPLPKFLVSLALRNALEEAGCQA DVWALQLQLYRQGGVNATQVLIQHLRGLQKGRSTERNVSVEALASALQLLAREQQSTG RVGRSLPTEDCENEKEQAVHNVVQLLPGVGTFYNLGTALYYATQNCLGKARERGRDGA IDLGYDLLMTMAGMSGGPMGLAISAALKPALRSGVQQLIQYYQDQKDANISQPETTKE GLRAISDVSDLEETTTLASFISEVVSSAPYWGWAIIKSYDLDPGAGSLEI" BASE COUNT 490 a 396 c 435 g 401 t ORIGIN 1 aggcagaaca ggatcaggaa gcgatcaaac ctaccaaggc agtctcactt ctcaatgact 61 ggactgtgtg ggtactctgc tccagacatg cgtggcctca gactcatcat gataccagtt 121 gagctgctac tttgctacct cctgctgcac cctgtggatg ccacttcata tggaaagcag 181 acaaatgtct tgatgcactt tcccttgtcc ttggaatccc agacaccctc ctcagacccc 241 ttgtcctgcc aatttctgca cccaaagtca ctgcctggtt tcagccacat ggcccctcta 301 cccaagttct tggtaagcct ggctctaagg aatgccctgg aggaagctgg ttgtcaggct 361 gatgtttggg ctctacagct acagctctac cgccagggtg gtgtgaatgc tacacaggtc 421 ctcatccagc atcttcgagg gctccagaaa ggcagaagca cagagaggaa cgtgtcagtg 481 gaagccctgg cctctgctct gcagctgtta gccagggagc agcaaagcac aggaagggtc 541 gggcgctccc tcccgacaga ggactgtgag aatgagaagg agcaagctgt gcacaatgta 601 gtccagctgc tgccaggagt gggaaccttc tacaacctgg gcacagcttt gtattatgct 661 actcaaaact gcctgggcaa ggccagggaa cgaggccgag atggggccat agatctggga 721 tatgaccttc tgatgaccat ggctgggatg tcaggggggc ctatgggtct agcgatcagt 781 gctgcactta aacctgcatt aaggtctggg gttcagcagt tgatccagta ttaccaagat 841 cagaaagacg caaacatctc tcagccggag accaccaagg agggtttgag ggccatctca 901 gatgtgagtg acttggaaga aacaactact ctggcttctt tcatatcaga agtagtaagt 961 tcagctccct actgggggtg ggccataatc aagagctatg acttagatcc tggggctggg 1021 agtcttgaga tataaaagaa tgtggtaacc acagaattaa taactgtact accctgacaa 1081 gctatataca tgtcttcaaa attttaatct gatttatcca ggaggaaggc tgtacagtaa 1141 aacgtaagaa cgtaaatgtt tgggtgttga agtcacaggg tttggtttcg aatctaggct 1201 ccacttgtta gagcctcggt gatcactgaa tagtaacttc tttcttgaac taagatcagt 1261 tttgaagttt ctaaaggaga tagaatgatt ttaacctcaa tgagttgccc tgtaaattta 1321 aaatgataca atgaatctaa aatgcttatc acagtacttt caataaatag ctattagcca 1381 ggtgcggtgg ctcacgcctg taatcccagc actgtgagag gctgaggcgg gatgatcacc 1441 tgaggtcagg agttcaagat cagcctgggc aacatggcga aaccccgtct ctacaataaa 1501 tacaaaaaat tatcctggcg gagttatgca cgcttgtagt cccaactacc tgggaggctg 1561 aggcgggaga atcacctgag cctgggaggt cgaggctgca gcgagccgag atcgcgccgc 1621 tgcattccag cctgggtgac agagcgagac catgtctcaa aaaaaataaa aataaaaaaa 1681 aattgttttc acaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //