LOCUS BC026217 2918 bp mRNA linear HUM 21-JUL-2008 DEFINITION Homo sapiens ataxia, cerebellar, Cayman type, mRNA (cDNA clone MGC:21400 IMAGE:4153341), complete cds. ACCESSION BC026217 VERSION BC026217.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2918) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2918) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 20 Row: b Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 61835122. FEATURES Location/Qualifiers source 1..2918 /db_xref="H-InvDB:HIT000040147" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21400 IMAGE:4153341" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2918 /gene="ATCAY" /gene_synonym="BNIP-H" /gene_synonym="CLAC" /db_xref="GeneID:85300" /db_xref="HGNC:HGNC:779" /db_xref="MIM:608179" CDS 373..1488 /gene="ATCAY" /gene_synonym="BNIP-H" /gene_synonym="CLAC" /codon_start=1 /product="ataxia, cerebellar, Cayman type" /protein_id="AAH26217.1" /db_xref="GeneID:85300" /db_xref="HGNC:HGNC:779" /db_xref="MIM:608179" /translation="MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDT SSPPNTLNFNGAHRKRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPD ETDSLEFLGNGNELEWEDDTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIG EQEHRIDLHMIRPYMKVVTHGGYYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYV ISSLELLVAEDYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWF IRTVLAISRPFISVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKARRES ARPQPEFVLPRSEEKPEVAPVENRSALVSEDQETSMS" BASE COUNT 699 a 868 c 797 g 554 t ORIGIN 1 gccgagcctc tgccagccct gagctgggaa gaagcagcta cctcggaggc agggcgcgca 61 ggcgggcggc gatgagaggg ggcgcagccg cagccccgcg ctggggagcc caccgctaac 121 cctgcacccc acccacccct gcacaaaaga gctggcgggc gctggccacg tcgccctggg 181 tgaccttcct cggatgcaga atccgcccct gcgagcatcc tcttcctcct aggctctgaa 241 ggcccgggga gcgtgagcga tgcccagctg cacccgggca gggctcgcct ttgtttgcca 301 gtaaggagga gaggctgtct cagctgcaga ggggtcatcc ctgcttcaag ccagtgcctc 361 ttcccagctc ccatggggac caccgaagcc acgctccgga tggaaaacgt ggacgtgaag 421 gaggaatggc aggacgaaga tcttcccagg ccactcccag aagagacggg ggtggaactg 481 cttggcagcc cggtggaaga cacatcctct cctcccaaca cgctaaattt caacggagcg 541 catcgtaaga ggaagacgct ggtggcccca gagatcaaca tttctctgga tcagagtgag 601 gggtccctgc tgtccgatga cttcttggat acccctgatg acctggatat taacgtggat 661 gacatcgaga cccccgatga gaccgactcg ctggagttcc tggggaatgg caacgaactg 721 gagtgggaag acgacacccc cgtggccacc gccaagaaca tgcccgggga cagcgcggat 781 ctatttgggg acggcacgac ggaggacggc agcgccgcca acgggcgcct gtggcggaca 841 gtgatcatcg gggagcaaga gcaccgtata gacctgcaca tgatccggcc ttacatgaaa 901 gtggtcaccc acggagggta ctacggcgaa ggcctcaacg ccatcatcgt cttcgcagcc 961 tgcttccttc cagacagcag cctccccgac taccactaca tcatggagaa cctcttcctg 1021 tacgtcatca gcagcttaga gctcctggtg gctgaggact acatgatcgt gtacctgaac 1081 ggtgccacgc cccggcggag gatgcctgga atcggctggc tgaagaagtg ctaccagatg 1141 atcgaccgga ggttgcggaa aaacctgaag tccttgatca tcgtccaccc ctcgtggttc 1201 attcggactg tgctggccat ctctcgccct ttcatcagcg tcaagttcat caacaagatc 1261 cagtacgtgc acagcttgga agacctggag caactcatcc ctatggaaca cgtccagatc 1321 ccagactgcg tcctgcaata cgaagaggaa agactgaagg ccaggaggga gagcgcgagg 1381 ccccagccgg agtttgtgct gcccaggtct gaagagaagc cagaggtggc accagtggaa 1441 aacaggtctg ctctggtctc agaagatcag gaaacaagca tgtcctgagg cgacgtgagc 1501 ataacaaagg acatggaaga agattccaga tgccagaaaa cctctgtcag acgcccactg 1561 gccccagatc tcatcctgcc tcatcctgag tcccaatctt ccaagggtgc cagcccctcc 1621 gttcatctct gaaacccagc atccttttca gctgcttgaa aacattgtat tttttttttt 1681 taacgatgca gtatttgtgc gttccagaaa agggcccagc tctgagcccc tcacccttcc 1741 acactcacga actctcagcc gaggaaggca agaagcgcag ggggtggccc gcgtggcgtc 1801 ggtggcctcc gctcctgctc gcagcccctg tggtcagagc tggatacaag attcaagacc 1861 cttctcttgc ttgtcacccg ctccaggttg gagccacaga cacccaccgc caccccggct 1921 gggtctgcgt cctttcctgt gcctttccct ccagaatgcg gcctcagacc tagaagctca 1981 acccccctat gagggccacg tcctggggta gctcctgacc tccgacctta tgtccaaatt 2041 tcacacccat ggtttttcat ttgacccgcc cccttctcgc tcataatgac acccagctcc 2101 tttgagagga tcagagccca ttgcacaaga agagccgctg ccaaccatcc ttgtcctccg 2161 attgcaaaat gacaccccag taatctagaa cattctcaag cccctttaac tcagatgtca 2221 agccaccggg caaaccccgt caatacctcc caccaaggaa tgagatatgt ggacctcact 2281 gctcccccaa cccagcgtca ggctgggaca cgccaacgct gttccgggtt ggaacagcag 2341 aggctcagaa actggctctg aaataggcag acctagcaag aggaagatac agggtatcgg 2401 gcgtttgagt gtttcagaag tcattcggga agataaatcc agtgcgctgg ccgcagccac 2461 ctgcattcaa agcttggacc agcgggttct tgttcgggag gcaaatttcc ctaggaaaaa 2521 gaagacagac ttttctaatg tggtccaaat gcggatcact ggtcagatgg actctagaag 2581 cactgagctc cctgtctctg gaagtattta agaaaaggct gggccaggca cgatggctca 2641 cgcctgtaat cccagacttt gggaggccga ggcaggcgga tcacctgagg tgaggagttt 2701 gagaacagcc tggccaacat ggtgaaacct catctctact aaaaatacaa aaattagcca 2761 ggcgtggtgg caggtgcctg taatcccagc tacttgggag gctgaggcat gagaatcact 2821 taaacctgag aggcagaggt tacagtgagc caagatcgtg ccactgcatt ccagcctggg 2881 cgacagagca agactctgtc tcaaaaaaaa aaaaaaaa //