LOCUS BC025787 1969 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens alkB, alkylation repair homolog 1 (E. coli), mRNA (cDNA clone MGC:34444 IMAGE:5229152), complete cds. ACCESSION BC025787 VERSION BC025787.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1969) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1969) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 49 Row: p Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5174384. FEATURES Location/Qualifiers source 1..1969 /db_xref="H-InvDB:HIT000040026" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34444 IMAGE:5229152" /tissue_type="Pancreas, Spleen, adult pooled" /clone_lib="NIH_MGC_120" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1969 /gene="ALKBH1" /gene_synonym="ABH" /gene_synonym="alkB" /gene_synonym="hABH" /db_xref="GeneID:8846" /db_xref="HGNC:HGNC:17911" /db_xref="MIM:605345" CDS 10..1179 /gene="ALKBH1" /gene_synonym="ABH" /gene_synonym="alkB" /gene_synonym="hABH" /codon_start=1 /product="alkB, alkylation repair homolog 1 (E. coli)" /protein_id="AAH25787.1" /db_xref="GeneID:8846" /db_xref="HGNC:HGNC:17911" /db_xref="MIM:605345" /translation="MGKMAAAVGSVATLATEPGEDAFRKLFRFYRQSRPGTADLEGVI DFSAAHAARGKGPGAQKVIKSQLNVSSVSEQNAYRAGLQPVSKWQAYGLKGYPGFIFI PNPFLPGYQWHWVKQCLKLYSQKPNVCNLDKHMSKEETQDLWEQSKEFLRYKEATKRR PRSLLEKLRWVTVGYHYNWDSKKYSADHYTPFPSDLGFLSEQVAAACGFEDFRAEAGI LNYYRLDSTLGIHVDRSELDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSGDIM IMSGFSRLLNHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSMEDWQVCASYL KTARVNMTVRQVLATDQNFPLEPIEDEKRDISTEGFCHLDDQNSEVKRARINPHS" BASE COUNT 538 a 477 c 444 g 510 t ORIGIN 1 ggccgcgaga tggggaagat ggcagcggcc gtgggctctg tggcgactct ggcgactgag 61 cccggggagg acgcctttcg gaaacttttc cgcttctacc gtcagagccg gcccgggacc 121 gcagacctgg aaggggtcat cgacttctcg gcggcccacg cagcccgtgg caagggtcct 181 ggtgcccaaa aggtgatcaa atctcagcta aatgtgtctt ctgtcagtga gcagaatgca 241 tatagagcag gtcttcagcc cgtcagcaag tggcaagcct atggactcaa aggctatcct 301 gggtttattt ttatcccaaa ccccttcctc ccaggttacc agtggcactg ggtgaaacag 361 tgccttaagt tatattccca gaaacctaat gtatgtaacc tggacaaaca catgtctaaa 421 gaagagaccc aagatctgtg ggaacagagc aaagagttcc tgaggtataa agaagcgact 481 aaacggagac cccgaagttt actggagaaa ctgcgttggg tgaccgtagg ctaccattat 541 aactgggaca gtaagaaata ctcagcagat cattacacac ctttcccttc tgacctgggt 601 ttcctctcag agcaagtagc cgctgcctgt ggatttgagg atttccgagc tgaagcaggg 661 atcctgaatt actaccgcct ggactccaca ctgggaatcc acgtagacag atctgagcta 721 gatcactcca aacccttgct gtcattcagc tttggacagt ccgccatctt tctcctgggt 781 ggtcttcaaa gggatgaggc ccccacggcc atgtttatgc acagtggtga catcatgata 841 atgtcgggtt tcagccgcct cttgaaccac gcagtccctc gtgtccttcc aaatccagaa 901 ggggaaggcc tgcctcactg cctagaggca cctctccctg ctgtcctccc gagagattca 961 atggtagagc cttgttctat ggaggactgg caggtgtgtg ccagctactt gaagaccgct 1021 cgtgttaaca tgactgtccg acaggtcctg gccacagacc agaatttccc tctagaaccc 1081 atcgaggatg aaaaaagaga catcagtaca gaaggtttct gccatctgga tgaccagaat 1141 agcgaagtaa aacgggccag gataaaccct cacagctgag acttggagat cccatccttt 1201 ttactcaggc acctgcttac cgtaaatgat catgttattg tgtattgccg tggacttcag 1261 cacccagaca agccaaaaac agagacaggg aagaactcat tgttgatcac actgttgcct 1321 tggaacccac gcagaagtaa actcatccac tttgctcaga gaagtgtttg acatggtctg 1381 ttcctagtta catgttggct gtaatgtatg ttgagaagtc agtccaagga ggtatgttct 1441 tccacaacag ccttctcagc ctctgctatt tcctttgagg aaggtagaag tgagtttcca 1501 tgtttgcaga gtatttaaat acctcagatt ttattaatga gaaatacagt acccctccct 1561 ccactccatc tggtaattta tggtaaaatt gtggttctgt gaaccagcta ttagtctcat 1621 cttcttaact ccctcaggca tcatcaaatt ctttgatctt ctcttccacc tctctggctc 1681 tcatggaaga atcctttaca catgaaaaca atggaactgg aaaatcttgt cttttagaaa 1741 agaaattaat cacaactatc tctcttgcct aaaagataaa tataggtaaa cccaaggaaa 1801 ggggaattta gtttctctac atgtcatttc ggtctccaaa ctccctgttg gctttttaat 1861 gcaattttaa ttgttggaat aaaaaagtcc caagggtgtt ttgttactgt tttctccatg 1921 aataaactca cttgatttta aattaaaaaa aaaaaaaaaa aaaaaaaaa //