LOCUS BC025231 904 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone IMAGE:4139762), partial cds. ACCESSION BC025231 VERSION BC025231.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 904) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 904) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: c Column: 20. FEATURES Location/Qualifiers source 1..904 /db_xref="H-InvDB:HIT000091001" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4139762" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..904 /gene="SNAP47" /gene_synonym="HEL170" /gene_synonym="SNAP-47" /gene_synonym="SVAP1" /db_xref="GeneID:116841" /db_xref="HGNC:HGNC:30669" CDS <1..311 /gene="SNAP47" /gene_synonym="HEL170" /gene_synonym="SNAP-47" /gene_synonym="SVAP1" /codon_start=3 /product="SNAP47 protein" /protein_id="AAH25231.1" /db_xref="GeneID:116841" /db_xref="HGNC:HGNC:30669" /translation="SPAEKSCSVWHAASGLMGRTLHREPPAGDQEGTALHLQTSLPAL SEADTQELTQILRRMKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMKRLT " BASE COUNT 222 a 248 c 254 g 180 t ORIGIN 1 cttcccccgc agagaagagc tgctcagtct ggcatgcagc atctgggctg atgggccgta 61 ccctgcaccg tgagccaccc gcaggagacc aggagggcac agcactgcac ctgcagacaa 121 gcctgccagc cctttctgag gcagataccc aggaactaac ccagatcctg aggaggatga 181 aggggctggc cctggaggcc gagagtgagc tggagagaca agacgaagcc ctggatggcg 241 ttgcagcagc tgtggacagg gcaaccttga ccatcgacaa gcacaacagg cggatgaaga 301 ggctgaccta ggggcagaac gtccctgcat tcctgtctca ccctgcacat cccgctgaga 361 tggagggctg ggcggcagtg ccagggctgc agaggcctgt ggccctccgg agtggtcttc 421 ctctggatgg ggctgctact gtggggctgc ttctgcacca ggggcctccc caggtgtgca 481 ccatgcctgc ctcccacttg gctgtccctg ctgctgggca ggacccggcc acatgttctg 541 cggatgctgc agaagtgtgg accatggcgg gaccccaagg acacttggca caggcctgga 601 agaggccgcc ctcgtcttgt ctcggctccc tttcatggac agactggcct tcttagctgt 661 actataaatt tgtgagtgaa gttagagccc agctcactta gccagctcac tttgagggca 721 tcctataaac acccaactgt tcttttatcg tctcggtttt agccaaaagt gaaattagca 781 tgactgcatc tttcaaacaa aaatattgat ttctgctttt agggccccgt ttccatccag 841 aaataaaggg aaatgctggc ttcagagtga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 901 aaaa //