LOCUS BC025231 904 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA
clone IMAGE:4139762), partial cds.
ACCESSION BC025231
VERSION BC025231.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 904)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 904)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: c Column: 20.
FEATURES Location/Qualifiers
source 1..904
/db_xref="H-InvDB:HIT000091001"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4139762"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..904
/gene="SNAP47"
/gene_synonym="HEL170"
/gene_synonym="SNAP-47"
/gene_synonym="SVAP1"
/db_xref="GeneID:116841"
/db_xref="HGNC:HGNC:30669"
CDS <1..311
/gene="SNAP47"
/gene_synonym="HEL170"
/gene_synonym="SNAP-47"
/gene_synonym="SVAP1"
/codon_start=3
/product="SNAP47 protein"
/protein_id="AAH25231.1"
/db_xref="GeneID:116841"
/db_xref="HGNC:HGNC:30669"
/translation="SPAEKSCSVWHAASGLMGRTLHREPPAGDQEGTALHLQTSLPAL
SEADTQELTQILRRMKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMKRLT
"
BASE COUNT 222 a 248 c 254 g 180 t
ORIGIN
1 cttcccccgc agagaagagc tgctcagtct ggcatgcagc atctgggctg atgggccgta
61 ccctgcaccg tgagccaccc gcaggagacc aggagggcac agcactgcac ctgcagacaa
121 gcctgccagc cctttctgag gcagataccc aggaactaac ccagatcctg aggaggatga
181 aggggctggc cctggaggcc gagagtgagc tggagagaca agacgaagcc ctggatggcg
241 ttgcagcagc tgtggacagg gcaaccttga ccatcgacaa gcacaacagg cggatgaaga
301 ggctgaccta ggggcagaac gtccctgcat tcctgtctca ccctgcacat cccgctgaga
361 tggagggctg ggcggcagtg ccagggctgc agaggcctgt ggccctccgg agtggtcttc
421 ctctggatgg ggctgctact gtggggctgc ttctgcacca ggggcctccc caggtgtgca
481 ccatgcctgc ctcccacttg gctgtccctg ctgctgggca ggacccggcc acatgttctg
541 cggatgctgc agaagtgtgg accatggcgg gaccccaagg acacttggca caggcctgga
601 agaggccgcc ctcgtcttgt ctcggctccc tttcatggac agactggcct tcttagctgt
661 actataaatt tgtgagtgaa gttagagccc agctcactta gccagctcac tttgagggca
721 tcctataaac acccaactgt tcttttatcg tctcggtttt agccaaaagt gaaattagca
781 tgactgcatc tttcaaacaa aaatattgat ttctgctttt agggccccgt ttccatccag
841 aaataaaggg aaatgctggc ttcagagtga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
901 aaaa
//