LOCUS       BC024145                2394 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens TNF receptor-associated factor 1, mRNA (cDNA clone
            MGC:10353 IMAGE:3832475), complete cds.
ACCESSION   BC024145
VERSION     BC024145.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2394)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC024145.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 14 Row: p Column: 11.
FEATURES             Location/Qualifiers
     source          1..2394
                     /db_xref="H-InvDB:HIT000039737"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:10353 IMAGE:3832475"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_20"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2394
                     /gene="TRAF1"
                     /gene_synonym="EBI6"
                     /gene_synonym="MGC:10353"
                     /db_xref="GeneID:7185"
                     /db_xref="HGNC:HGNC:12031"
                     /db_xref="MIM:601711"
     CDS             79..1329
                     /gene="TRAF1"
                     /gene_synonym="EBI6"
                     /gene_synonym="MGC:10353"
                     /codon_start=1
                     /product="TNF receptor-associated factor 1"
                     /protein_id="AAH24145.1"
                     /db_xref="GeneID:7185"
                     /db_xref="HGNC:HGNC:12031"
                     /db_xref="MIM:601711"
                     /translation="MASSSGSSPRPAPDENEFPFGCPPTVCQDPKEPRALCCAGCLSE
                     NPRNGEDQICPKCRGEDLQSISPGSRLRTQEKAHPEVAEAGIGCPFAGVGCSFKGSPQ
                     SVQEHEVTSQTSHLNLLLGFMKQWKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDL
                     EVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATS
                     IHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNV
                     TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYD
                     ALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSK
                     LQSPKHAYVKDDTMFLKCIVETST"
BASE COUNT          552 a          708 c          685 g          449 t
ORIGIN      
        1 caggccagga ctccacaagg ctggtcccct gccctggagc aacttaaaca ggccctctgg
       61 ccagcctgga accctgagat ggcctccagc tcaggcagca gtcctcgccc ggcccctgat
      121 gagaatgagt ttccctttgg gtgccctccc accgtctgcc aggacccaaa ggagcccagg
      181 gctctctgct gtgcaggctg tctctctgag aacccgagga atggcgagga tcagatctgc
      241 cccaaatgca gaggggaaga cctccagtct ataagcccag gaagccgtct tcgaactcag
      301 gagaaggctc accccgaggt ggctgaggct ggaattgggt gcccctttgc aggtgtcggc
      361 tgctccttca agggaagccc acagtctgtg caagagcatg aggtcacctc ccagacctcc
      421 cacctaaacc tgctgttggg gttcatgaaa cagtggaagg cccggctggg ctgtggcctg
      481 gagtctgggc ccatggccct ggagcagaac ctgtcagacc tgcagctgca ggcagccgtg
      541 gaagtggcgg gggacctgga ggtcgattgc taccgggcac cctgctccga gagccaggag
      601 gagctggccc tgcagcactt catgaaggag aagcttctgg ctgagctgga ggggaagctg
      661 cgtgtgtttg agaacattgt tgctgtcctc aacaaggagg tggaggcctc ccacctggcc
      721 ctggccacct ctatccacca gagccagctg gaccgtgagc gcatcctgag cttggagcag
      781 agggtggtgg agcttcagca gaccctggcc cagaaagacc aggccctggg caagctggag
      841 cagagcttgc gcctcatgga ggaggcctcc ttcgatggca ctttcctgtg gaagatcacc
      901 aatgtcacca ggcggtgcca tgagtcggcc tgtggcagga ccgtcagcct cttctcccca
      961 gccttctaca ctgccaagta tggctacaag ttgtgcctgc ggctgtacct gaatggagat
     1021 ggcactggaa agagaaccca tctgtcgctc ttcatcgtga tcatgagagg ggagtatgat
     1081 gcgctgctgc cgtggccttt ccggaacaag gtcaccttca tgctgctgga ccagaacaac
     1141 cgtgagcacg ccattgacgc cttccggcct gacctaagct cagcgtcctt ccagaggccc
     1201 cagagtgaaa ccaacgtggc cagtggatgc ccactcttct tccccctcag caaactgcag
     1261 tcacccaagc acgcctacgt gaaggacgac acaatgttcc tcaagtgcat tgtggagacc
     1321 agcacttagg gtgggcgggg ctcctgaggg agctccaact cagaagggag ctagccagag
     1381 gactgtgatg ccctgccctt ggcacccaag acctcagggc acaaagatgg gtgaaggctg
     1441 gcatgatcca agcaagactg aggggtcgac ttcgggctgg ccatctggtt aggatggcag
     1501 gacgtgggct gggcccacaa aggcaaaggg tccagaagga gacaggcaga gctgctcccc
     1561 tctgcacgga ccatgcgaca ctgggaggcc agtgagccac tccggccccg aatgttgagg
     1621 tggactctca ccaaatgaga agaaaatgga accaggcttg gaaccgtagg acccaagcag
     1681 agaagctctc gggctaggaa gatctctgca gggccgccag ggagacctgg acacaggcct
     1741 gctctctttt tctccagggt cagaaacagg accgggtgga agggatgggg tgccagtttg
     1801 aatgcagtct gtccaggctc gtcattggag gtgaacaagc aaacccagag ggctccacta
     1861 ggacttcaaa ttgggggttg gatttgaaga cttttaagtt tccttccagc ccagaaagtc
     1921 tctcattcta ggcctcctgg cccaggtgag tcctagagct acaggggttc tggaaacatt
     1981 caggagcttc ctgtcctccc agctcctcac tcaccttcag taacccccac tggactgacc
     2041 tggtccacag ggcacctgcc accctgggcc tggcagctca gcttccccaa cacgcaggag
     2101 cacacccagc ccccacatcc tgtgcctcca tcagctaaac accacgtcac ttcatgcagg
     2161 tgaaacccag tcactgtgag ctcccaggtg cagccagagg cacctcaaga agaagagggg
     2221 cataaacttt cctcttcctg cctagaggcc ccacctttgg tgctttccag aatcccgtaa
     2281 cacctgatta actgaggcat ccacttcttt cagcagactg atcaggacct ccaagccact
     2341 gagcaatgta taaccccaaa gaaataattt ttagaaaaaa aaaaaaaaaa aaaa
//