LOCUS BC023984 1238 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens high-mobility group nucleosome binding domain 1, mRNA (cDNA clone MGC:23740 IMAGE:4104558), complete cds. ACCESSION BC023984 VERSION BC023984.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1238) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1238) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 32 Row: e Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1238 /db_xref="H-InvDB:HIT000039709" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23740 IMAGE:4104558" /tissue_type="Bone marrow, acute myelogenous leukemia" /clone_lib="NIH_MGC_55" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1238 /gene="HMGN1" /db_xref="GeneID:3150" /db_xref="HGNC:HGNC:4984" /db_xref="MIM:163920" CDS 117..419 /gene="HMGN1" /codon_start=1 /product="high-mobility group nucleosome binding domain 1" /protein_id="AAH23984.1" /db_xref="GeneID:3150" /db_xref="HGNC:HGNC:4984" /db_xref="MIM:163920" /translation="MPKRKVSSAEGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDK SSDKKVQTKGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKSD" BASE COUNT 382 a 242 c 284 g 330 t ORIGIN 1 gggggcagcg gcaaggcagc ccagtttcgc gaaggctgtc ggcgcgccgc ggcccgcagg 61 cacccggcac gcgccttccc cgcaggcacc cggcacgcgc cttccccgcc gccacgatgc 121 ccaagaggaa ggtcagctcc gccgaaggcg ccgccaagga agagcccaag aggagatcgg 181 cgcggttgtc agctaaacct cctgcaaaag tggaagcgaa gccgaaaaag gcagcagcga 241 aggataaatc ttcagacaaa aaagtgcaaa caaaagggaa aaggggagca aagggaaaac 301 aggccgaagt ggctaaccaa gaaactaaag aagacttacc tgcggaaaac ggggaaacga 361 agactgagga gagtccagcc tctgatgaag caggagagaa agaagccaag tctgattaat 421 aaccatatac catgtcttat cagtggtccc tgtctccctt cttgtacaat ccagaggaat 481 atttttatca actattttgt aaatgcaagt tttttagtag ctctagaaac atttttaaga 541 aggagggaat cccacctcat cccatttttt aagtgtaaat gctttttttt aagaggtgaa 601 atcatttgct ggttgtttat tttttggtac aaccagaaaa tagtgtggga tattgaatta 661 tgggaggctc tgactgtctc gggtgtcagc ttaacattcc acagatgggg ggttagtttt 721 tatatcctat aatacaaagc atattaaatg gcaatatgga gtcagtcctg catttaatgt 781 cttgaacatt ttaaattact tctattacca tgttgttttt tagtagaatt gtttcctaaa 841 gaaaaccact ctttgatcat ggctctctct gccagaattg tgtgcactct gtaacatctt 901 tggttgtggt agtcctgttt tcctaataac tttgttactg tgctgtgaaa gattacagat 961 ttgaacatgt agtgtacgtg ctattgagtt gtgaactggt gggccgtatg taacagctga 1021 ccaacgtgaa gatactggta cttgatagcc tcttaaggaa aatttgcttc caaattttaa 1081 gctggaaagt cactggaata actttaaaaa agaattacaa tacatggctt tttagaattt 1141 cgttacgtat gttaagattt gtgtacaaat tgaaatgtct gtactgatcc tcaaccaata 1201 aaatctcagt tatgaaaata aaaaaaaaaa aaaaaaaa //