LOCUS BC023984 1238 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high-mobility group nucleosome binding domain 1, mRNA
(cDNA clone MGC:23740 IMAGE:4104558), complete cds.
ACCESSION BC023984
VERSION BC023984.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1238)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1238)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: e Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1238
/db_xref="H-InvDB:HIT000039709"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23740 IMAGE:4104558"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1238
/gene="HMGN1"
/db_xref="GeneID:3150"
/db_xref="HGNC:HGNC:4984"
/db_xref="MIM:163920"
CDS 117..419
/gene="HMGN1"
/codon_start=1
/product="high-mobility group nucleosome binding domain 1"
/protein_id="AAH23984.1"
/db_xref="GeneID:3150"
/db_xref="HGNC:HGNC:4984"
/db_xref="MIM:163920"
/translation="MPKRKVSSAEGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDK
SSDKKVQTKGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKSD"
BASE COUNT 382 a 242 c 284 g 330 t
ORIGIN
1 gggggcagcg gcaaggcagc ccagtttcgc gaaggctgtc ggcgcgccgc ggcccgcagg
61 cacccggcac gcgccttccc cgcaggcacc cggcacgcgc cttccccgcc gccacgatgc
121 ccaagaggaa ggtcagctcc gccgaaggcg ccgccaagga agagcccaag aggagatcgg
181 cgcggttgtc agctaaacct cctgcaaaag tggaagcgaa gccgaaaaag gcagcagcga
241 aggataaatc ttcagacaaa aaagtgcaaa caaaagggaa aaggggagca aagggaaaac
301 aggccgaagt ggctaaccaa gaaactaaag aagacttacc tgcggaaaac ggggaaacga
361 agactgagga gagtccagcc tctgatgaag caggagagaa agaagccaag tctgattaat
421 aaccatatac catgtcttat cagtggtccc tgtctccctt cttgtacaat ccagaggaat
481 atttttatca actattttgt aaatgcaagt tttttagtag ctctagaaac atttttaaga
541 aggagggaat cccacctcat cccatttttt aagtgtaaat gctttttttt aagaggtgaa
601 atcatttgct ggttgtttat tttttggtac aaccagaaaa tagtgtggga tattgaatta
661 tgggaggctc tgactgtctc gggtgtcagc ttaacattcc acagatgggg ggttagtttt
721 tatatcctat aatacaaagc atattaaatg gcaatatgga gtcagtcctg catttaatgt
781 cttgaacatt ttaaattact tctattacca tgttgttttt tagtagaatt gtttcctaaa
841 gaaaaccact ctttgatcat ggctctctct gccagaattg tgtgcactct gtaacatctt
901 tggttgtggt agtcctgttt tcctaataac tttgttactg tgctgtgaaa gattacagat
961 ttgaacatgt agtgtacgtg ctattgagtt gtgaactggt gggccgtatg taacagctga
1021 ccaacgtgaa gatactggta cttgatagcc tcttaaggaa aatttgcttc caaattttaa
1081 gctggaaagt cactggaata actttaaaaa agaattacaa tacatggctt tttagaattt
1141 cgttacgtat gttaagattt gtgtacaaat tgaaatgtct gtactgatcc tcaaccaata
1201 aaatctcagt tatgaaaata aaaaaaaaaa aaaaaaaa
//