LOCUS BC022499 2673 bp mRNA linear HUM 30-JUL-2005 DEFINITION Homo sapiens ephrin-B3, mRNA (cDNA clone IMAGE:4814898), partial cds. ACCESSION BC022499 VERSION BC022499.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2673) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2673) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: l Column: 19. FEATURES Location/Qualifiers source 1..2673 /db_xref="H-InvDB:HIT000090635" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4814898" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene <1..2673 /gene="EFNB3" /gene_synonym="EFL6" /gene_synonym="LERK8" /db_xref="GeneID:1949" /db_xref="MIM:602297" CDS <1..859 /gene="EFNB3" /gene_synonym="EFL6" /gene_synonym="LERK8" /codon_start=2 /product="EFNB3 protein" /protein_id="AAH22499.1" /db_xref="GeneID:1949" /db_xref="MIM:602297" /translation="DRLDLLCPRARPPGPHSSPNYEFYKLYLVGGAQGRRCEAPPAPN LLLTCDRPDLDLRFTIKFQEYSPNLWGHEFRSHHDYYIIATSDGTREGLESLQGGVCL TRGMKVLLRVGQSPRGGAVPRKPVSEMPMERDRGAAHSLEPGKENLPGDPTSNATSRG AEGPLPPPSMPAVAGAAGGLALLLLGVAGAGGAMCWRRRRAKPSESRHPGPGSFGRGG SLGLGGGGGMGPREAEPGELGIALRGGGAADPPFCPHYEKVSGDYGHPVYIVQDGPPQ SPPNIYYKV" BASE COUNT 532 a 788 c 703 g 650 t ORIGIN 1 ggaccggcta gacctgctct gcccccgggc ccggcctcct ggccctcact cctctcctaa 61 ttatgagttc tacaagctgt acctggtagg gggtgctcag ggccggcgct gtgaggcacc 121 ccctgcccca aacctccttc tcacttgtga tcgcccagac ctggatctcc gcttcaccat 181 caagttccag gagtatagcc ctaatctctg gggccacgag ttccgctcgc accacgatta 241 ctacatcatt gccacatcgg atgggacccg ggagggcctg gagagcctgc agggaggtgt 301 gtgcctaacc agaggcatga aggtgcttct ccgagtggga caaagtcccc gaggaggggc 361 tgtcccccga aaacctgtgt ctgaaatgcc catggaaaga gaccgagggg cagcccacag 421 cctggagcct gggaaggaga acctgccagg tgaccccacc agcaatgcaa cctcccgggg 481 tgctgaaggc cccctgcccc ctcccagcat gcctgcagtg gctggggcag caggggggct 541 ggcgctgctc ttgctgggcg tggcaggggc tgggggtgcc atgtgttggc ggagacggcg 601 ggccaagcct tcggagagtc gccaccctgg tcctggctcc ttcgggaggg gagggtctct 661 gggcctgggg ggtggaggtg ggatgggacc tcgggaggct gagcctgggg agctagggat 721 agctctgcgg ggtggcgggg ctgcagatcc ccccttctgc ccccactatg agaaggtgag 781 tggtgactat gggcatcctg tgtatatcgt gcaggatggg cccccccaga gccctccaaa 841 catctactac aaggtatgag ggctcctctc acgtggctat cctgaatcca gcccttcttg 901 gggtgctcct ccagtttaat tcctggtttg agggacacct ctaacatctc ggccccctgt 961 gcccccccag ccccttcact cctcccggct gctgtcctcg tctccacttt taggattcct 1021 taggattccc actgccccac ttcctgccct cccgtttggc catgggtgcc cccctctgtc 1081 tcagtgtccc tggatccttt ttccttgggg aggggcacag gctcagcctc ctctctgacc 1141 atgacccagg catccttgtc cccctcaccc acccagagct aggggcggga acagcccacc 1201 ttttggttgg caccgccttc tttctgcctc tcactggttt tctcttctct atctcttatt 1261 ctttccctct cttccgtctc taggtctgtt cttcttccct agcatcctcc tccccacatc 1321 tcctttcacc ctcttggctt cttatcctgt gcctctccca tctcctgggt gggggcatca 1381 aagcatttct ccccttagct ttcagccccc cttctgacct ctcataccaa ccactcccct 1441 cagtctgcca aaaatggggg ccttatgggg aaggctctga cactccaccc cagctcaggc 1501 catgggcagc agggctccat tctctggcct ggcccaggcc tctacatact tactccagcc 1561 atttggggtg gttgggtcat gacagctacc atgagaagaa gtgtcccgtt ttgtccagtg 1621 gccaatagca agatatgaac cggtcgggac atgtatggac ttggtctgat gccgaatggg 1681 ccacttggga ccggaagtga cttgctccag acaagaggtg accaggccca gacagaaatg 1741 gcctgggaag tagcagaagc agtgcagcag gaactggaag tgccttcatc caggacagga 1801 agtagcactt ctgaaacagg aagtggtctg gctggaactc caagtggctt agtctggggg 1861 atcaggaggt gggaggtgga tggttcttat tctgtggaga agaagggcgg gaagaacttc 1921 ctttcaggag gaagctggaa cttactgact gtaagaggtt agaggtggac cgagaaggac 1981 ttttcccagt cttcagtggc acttcccaag atctcccttc ccttgtgctc tgtgctgatt 2041 ttaggacagc taagatgact gccatgtgct gtggcaggcc taatttgtct tgttctttcc 2101 tttccatatc ccagtataat ctctgttaat caacaggact accccaagaa cccatgtgct 2161 ctcccgagta acccagatgg ctgtcttgtt cattccatcc tacatttctg actcctttca 2221 gactcaacac agttcccttc ttagtgacca aaatggtggc ctactggctg gtctagctga 2281 cagtggtact tagcaaaggc cactgtttcc atagtgacca gctgatacct cttcctgccc 2341 tctagtgtgc aattgggtgt tgcctcagtt tcctcccagc tcagttttat tagatcaaag 2401 ctgttgttgg gcaccaggtt ggccacctca atcaccagcc aagatggttg ctttgtccac 2461 cagaggtcaa gttcacctct ctggtgctgt agttcccagc tccttcctga tttttctaat 2521 cgctccttct ggggaacagg aagttgatat tgccatggtg gcgggatatg ccgtcacctc 2581 agtagtttta ctgtaaaagg gaaatttgaa caacaaaaac caaaaaaaat aaaaataaaa 2641 aacttcaaaa gttgacgaaa aaaaaaaaaa aaa //