LOCUS BC022499 2673 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens ephrin-B3, mRNA (cDNA clone IMAGE:4814898), partial
cds.
ACCESSION BC022499
VERSION BC022499.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2673)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2673)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: l Column: 19.
FEATURES Location/Qualifiers
source 1..2673
/db_xref="H-InvDB:HIT000090635"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4814898"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2673
/gene="EFNB3"
/gene_synonym="EFL6"
/gene_synonym="LERK8"
/db_xref="GeneID:1949"
/db_xref="MIM:602297"
CDS <1..859
/gene="EFNB3"
/gene_synonym="EFL6"
/gene_synonym="LERK8"
/codon_start=2
/product="EFNB3 protein"
/protein_id="AAH22499.1"
/db_xref="GeneID:1949"
/db_xref="MIM:602297"
/translation="DRLDLLCPRARPPGPHSSPNYEFYKLYLVGGAQGRRCEAPPAPN
LLLTCDRPDLDLRFTIKFQEYSPNLWGHEFRSHHDYYIIATSDGTREGLESLQGGVCL
TRGMKVLLRVGQSPRGGAVPRKPVSEMPMERDRGAAHSLEPGKENLPGDPTSNATSRG
AEGPLPPPSMPAVAGAAGGLALLLLGVAGAGGAMCWRRRRAKPSESRHPGPGSFGRGG
SLGLGGGGGMGPREAEPGELGIALRGGGAADPPFCPHYEKVSGDYGHPVYIVQDGPPQ
SPPNIYYKV"
BASE COUNT 532 a 788 c 703 g 650 t
ORIGIN
1 ggaccggcta gacctgctct gcccccgggc ccggcctcct ggccctcact cctctcctaa
61 ttatgagttc tacaagctgt acctggtagg gggtgctcag ggccggcgct gtgaggcacc
121 ccctgcccca aacctccttc tcacttgtga tcgcccagac ctggatctcc gcttcaccat
181 caagttccag gagtatagcc ctaatctctg gggccacgag ttccgctcgc accacgatta
241 ctacatcatt gccacatcgg atgggacccg ggagggcctg gagagcctgc agggaggtgt
301 gtgcctaacc agaggcatga aggtgcttct ccgagtggga caaagtcccc gaggaggggc
361 tgtcccccga aaacctgtgt ctgaaatgcc catggaaaga gaccgagggg cagcccacag
421 cctggagcct gggaaggaga acctgccagg tgaccccacc agcaatgcaa cctcccgggg
481 tgctgaaggc cccctgcccc ctcccagcat gcctgcagtg gctggggcag caggggggct
541 ggcgctgctc ttgctgggcg tggcaggggc tgggggtgcc atgtgttggc ggagacggcg
601 ggccaagcct tcggagagtc gccaccctgg tcctggctcc ttcgggaggg gagggtctct
661 gggcctgggg ggtggaggtg ggatgggacc tcgggaggct gagcctgggg agctagggat
721 agctctgcgg ggtggcgggg ctgcagatcc ccccttctgc ccccactatg agaaggtgag
781 tggtgactat gggcatcctg tgtatatcgt gcaggatggg cccccccaga gccctccaaa
841 catctactac aaggtatgag ggctcctctc acgtggctat cctgaatcca gcccttcttg
901 gggtgctcct ccagtttaat tcctggtttg agggacacct ctaacatctc ggccccctgt
961 gcccccccag ccccttcact cctcccggct gctgtcctcg tctccacttt taggattcct
1021 taggattccc actgccccac ttcctgccct cccgtttggc catgggtgcc cccctctgtc
1081 tcagtgtccc tggatccttt ttccttgggg aggggcacag gctcagcctc ctctctgacc
1141 atgacccagg catccttgtc cccctcaccc acccagagct aggggcggga acagcccacc
1201 ttttggttgg caccgccttc tttctgcctc tcactggttt tctcttctct atctcttatt
1261 ctttccctct cttccgtctc taggtctgtt cttcttccct agcatcctcc tccccacatc
1321 tcctttcacc ctcttggctt cttatcctgt gcctctccca tctcctgggt gggggcatca
1381 aagcatttct ccccttagct ttcagccccc cttctgacct ctcataccaa ccactcccct
1441 cagtctgcca aaaatggggg ccttatgggg aaggctctga cactccaccc cagctcaggc
1501 catgggcagc agggctccat tctctggcct ggcccaggcc tctacatact tactccagcc
1561 atttggggtg gttgggtcat gacagctacc atgagaagaa gtgtcccgtt ttgtccagtg
1621 gccaatagca agatatgaac cggtcgggac atgtatggac ttggtctgat gccgaatggg
1681 ccacttggga ccggaagtga cttgctccag acaagaggtg accaggccca gacagaaatg
1741 gcctgggaag tagcagaagc agtgcagcag gaactggaag tgccttcatc caggacagga
1801 agtagcactt ctgaaacagg aagtggtctg gctggaactc caagtggctt agtctggggg
1861 atcaggaggt gggaggtgga tggttcttat tctgtggaga agaagggcgg gaagaacttc
1921 ctttcaggag gaagctggaa cttactgact gtaagaggtt agaggtggac cgagaaggac
1981 ttttcccagt cttcagtggc acttcccaag atctcccttc ccttgtgctc tgtgctgatt
2041 ttaggacagc taagatgact gccatgtgct gtggcaggcc taatttgtct tgttctttcc
2101 tttccatatc ccagtataat ctctgttaat caacaggact accccaagaa cccatgtgct
2161 ctcccgagta acccagatgg ctgtcttgtt cattccatcc tacatttctg actcctttca
2221 gactcaacac agttcccttc ttagtgacca aaatggtggc ctactggctg gtctagctga
2281 cagtggtact tagcaaaggc cactgtttcc atagtgacca gctgatacct cttcctgccc
2341 tctagtgtgc aattgggtgt tgcctcagtt tcctcccagc tcagttttat tagatcaaag
2401 ctgttgttgg gcaccaggtt ggccacctca atcaccagcc aagatggttg ctttgtccac
2461 cagaggtcaa gttcacctct ctggtgctgt agttcccagc tccttcctga tttttctaat
2521 cgctccttct ggggaacagg aagttgatat tgccatggtg gcgggatatg ccgtcacctc
2581 agtagtttta ctgtaaaagg gaaatttgaa caacaaaaac caaaaaaaat aaaaataaaa
2641 aacttcaaaa gttgacgaaa aaaaaaaaaa aaa
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