LOCUS BC022015 1600 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens calponin 1, basic, smooth muscle, mRNA (cDNA clone MGC:26510 IMAGE:4824832), complete cds. ACCESSION BC022015 VERSION BC022015.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1600) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1600) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC022015.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: j Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 56676373. FEATURES Location/Qualifiers source 1..1600 /db_xref="H-InvDB:HIT000039351" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26510 IMAGE:4824832" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1600 /gene="CNN1" /gene_synonym="Sm-Calp" /gene_synonym="SMCC" /db_xref="GeneID:1264" /db_xref="HGNC:HGNC:2155" /db_xref="MIM:600806" CDS 165..1058 /gene="CNN1" /gene_synonym="Sm-Calp" /gene_synonym="SMCC" /codon_start=1 /product="calponin 1, basic, smooth muscle" /protein_id="AAH22015.1" /db_xref="GeneID:1264" /db_xref="HGNC:HGNC:2155" /db_xref="MIM:600806" /translation="MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGR RIGNNFMDGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKP HDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNVGVKYAEKQERKFEPGKLREG RNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAG MTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTP EYPELGEPAHNHHAHNYYNSA" BASE COUNT 397 a 495 c 451 g 257 t ORIGIN 1 ggcaggcccc tacagccaat ggaacggccc tggaagagac ccgggtcgcc tccggagctt 61 caaaaacatg tgaggaggga agagtgtgca gacggaactt cagccgctgc ctctgttctc 121 agcgtcagtg ccgccactgc ccccgccaga gcccaccggc cagcatgtcc tctgctcact 181 tcaaccgagg ccctgcctac gggctgtcag ccgaggttaa gaacaagctg gcccagaagt 241 atgaccacca gcgggagcag gagctgagag agtggatcga gggggtgaca ggccgtcgca 301 tcggcaacaa cttcatggac ggcctcaaag atggcatcat tctttgcgaa ttcatcaata 361 agctgcagcc aggctccgtg aagaagatca atgagtcaac ccaaaattgg caccagctgg 421 agaacatcgg caacttcatc aaggccatca ccaagtatgg ggtgaagccc cacgacattt 481 ttgaggccaa cgacctgttt gagaacacca accatacaca ggtgcagtcc accctcctgg 541 ctttggccag catggcgaag acgaaaggaa acaaggtgaa cgtgggagtg aagtacgcag 601 agaagcagga gcggaaattc gagccgggga agctaagaga agggcggaac atcattgggc 661 tgcagatggg caccaacaag tttgccagcc agcagggcat gacggcctat ggcacccggc 721 gccacctcta cgaccccaag ctgggcacag accagcctct ggaccaggcg accatcagcc 781 tgcagatggg caccaacaaa ggagccagcc aggctggcat gactgcgcca gggaccaagc 841 ggcagatctt cgagccgggg ctgggcatgg agcactgcga cacgctcaat gtcagcctgc 901 agatgggcag caacaagggc gcctcgcagc ggggcatgac ggtgtatggg ctgccacgcc 961 aggtctacga ccccaagtac tgtctgactc ccgagtaccc agagctgggt gagcccgccc 1021 acaaccacca cgcacacaac tactacaatt ccgcctaggg ccacaaggcc ttccctgttt 1081 tccccccaag ggaggctgct gctgctcttg gctggaccca gccaggccca gccgaccccc 1141 tctccctgca tggcatcctc cagcccctgt agaactcaac ctctacaggg ttagagtttg 1201 gagagagcag actggcgggg ggcccattgg ggggaagggg accctccgct ctgtagtgct 1261 acagggtcca acatagagcc gggtgtcccc aacagcgccc aaaggacgca ctgagcaacg 1321 ctattccagc tgtcccccca ctccctcaca agtgggtacc cccaggacca gaagctcccc 1381 cagcaaagcc cccagagccc aggctcggcc tgccccccac cccattcccg cagtgggagc 1441 aaactgcatg cccagagacc cagcggacac acgcggtttg gtttgcagcg actggcatac 1501 tatgtggatg tgacagtggc gtttgtaatg agagcacttt cttttttttc tatttcactg 1561 gagcacaata aatggctgta aaatctcaaa aaaaaaaaaa //