LOCUS BC022014 1575 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens Parkinson disease (autosomal recessive, juvenile) 2, parkin, mRNA (cDNA clone MGC:26491 IMAGE:4824892), complete cds. ACCESSION BC022014 VERSION BC022014.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1575) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1575) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC022014.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: j Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4758883. FEATURES Location/Qualifiers source 1..1575 /db_xref="H-InvDB:HIT000039350" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26491 IMAGE:4824892" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1575 /gene="PARK2" /gene_synonym="AR-JP" /gene_synonym="PDJ" /gene_synonym="PRKN" /db_xref="GeneID:5071" /db_xref="MIM:602544" CDS 99..1262 /gene="PARK2" /gene_synonym="AR-JP" /gene_synonym="PDJ" /gene_synonym="PRKN" /codon_start=1 /product="PARK2 protein" /protein_id="AAH22014.1" /db_xref="GeneID:5071" /db_xref="MIM:602544" /translation="MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLRVI FAGKELRNDWTVQNCDLDQQSIVHIVQRPWRKGQEMNATGGDDPRNAAGGCEREPQSL TRVDLSSSVLPGDSVGLAVILHTDSRKDSPPAGSPAGRSIYNSFYVYCKGPCQRVQPG KLRVQCSTCRQATLTLTQGPSCWDDVLIPNRMSGECQSPHCPGTSAEFFFKCGAHPTS DKETSVALHLIATNSRNITCITCTDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQ FVHDPQLGYSLPCVGTGDTVVLRGALGGFRRGVAGCPNSLIKELHHFRILGEEQYNRY QQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGYGQRRTK" BASE COUNT 411 a 373 c 440 g 351 t ORIGIN 1 gggatttaac ccaggagagc cgctggtggg aggcgcggct ggcgccgctg cgcgcatggg 61 cctgttcctg gcccgcagcc gccacctacc cagtgaccat gatagtgttt gtcaggttca 121 actccagcca tggtttccca gtggaggtcg attctgacac cagcatcttc cagctcaagg 181 aggtggttgc taagcgacag ggggttccgg ctgaccagtt gcgtgtgatt ttcgcaggga 241 aggagctgag gaatgactgg actgtgcaga attgtgacct ggatcagcag agcattgttc 301 acattgtgca gagaccgtgg agaaaaggtc aagaaatgaa tgcaactgga ggcgacgacc 361 ccagaaacgc ggcgggaggc tgtgagcggg agccccagag cttgactcgg gtggacctca 421 gcagctcagt cctcccagga gactctgtgg ggctggctgt cattctgcac actgacagca 481 ggaaggactc accaccagct ggaagtccag caggtagatc aatctacaac agcttttatg 541 tgtattgtaa aggcccctgt caaagagtgc agccggggaa actcagggta cagtgcagca 601 cctgcaggca ggcaacgctc accttgaccc agggtccatc ttgctgggat gatgttttaa 661 ttccaaaccg gatgagtggt gaatgccaat ccccacactg ccctgggact agtgcagaat 721 ttttctttaa atgtggagca caccccacct ctgacaagga aacatcagta gctttgcacc 781 tgatcgcaac aaatagtcgg aacatcactt gcattacgtg cacagacgtc aggagccccg 841 tcctggtttt ccagtgcaac tcccgccacg tgatttgctt agactgtttc cacttatact 901 gtgtgacaag actcaatgat cggcagtttg ttcacgaccc tcaacttggc tactccctgc 961 cttgtgtggg aactggagac acagtggtgc ttagaggagc tctgggggga ttcaggagag 1021 gagtcgctgg ctgtcccaac tccttgatta aagagctcca tcacttcagg attctgggag 1081 aagagcagta caaccggtac cagcagtatg gtgcagagga gtgtgtcctg cagatggggg 1141 gcgtgttatg cccccgccct ggctgtggag cggggctgct gccggagcct gaccagagga 1201 aagtcacctg cgaagggggc aatggcctgg gctgtgggta tggacaacga agaacaaaat 1261 aagctgcctc agggagaagt gagtgcctca ttcaatacat cgttcaagga aaagtcattg 1321 gtagcaaagc tatagaagaa ttacagagtt ccagatgtgg aaaaagccct agacgtcatt 1381 aactccagtg attatcagga tgtggttcac agatttattg taagatgcct gtgaattcac 1441 ccgtgcttaa tttttttttc cctcaattat caagatagaa aaagtacaac tcttaccatg 1501 tgggtatgca agaaatgtta gctgttacaa aaaaaatcgc gtataaaaaa gttgaaaacc 1561 aaataaaaaa aaaaa //