LOCUS BC021711 2665 bp mRNA linear HUM 28-JUL-2006 DEFINITION Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative), mRNA (cDNA clone MGC:26594 IMAGE:4826920), complete cds. ACCESSION BC021711 VERSION BC021711.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2665) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2665) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC021711.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: p Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 44888830. FEATURES Location/Qualifiers source 1..2665 /db_xref="H-InvDB:HIT000039261" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26594 IMAGE:4826920" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2665 /gene="APOBEC4" /gene_synonym="MGC26594" /db_xref="GeneID:403314" /db_xref="HGNC:HGNC:32152" /db_xref="MIM:609908" CDS 273..1376 /gene="APOBEC4" /gene_synonym="MGC26594" /codon_start=1 /product="apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)" /protein_id="AAH21711.1" /db_xref="GeneID:403314" /db_xref="HGNC:HGNC:32152" /db_xref="MIM:609908" /translation="MEPIYEEYLANHGTIVKPYYWLSFSLDCSNCPYHIRTGEEARVS LTEFCQIFGFPYGTTFPQTKHLTFYELKTSSGSLVQKGHASSCTGNYIHPESMLFEMN GYLDSAIYNNDSIRHIILYSNNSPCNEANHCCISKMYNFLITYPGITLSIYFSQLYHT EMDFPASAWNREALRSLASLWPRVVLSPISGGIWHSVLHSFISGVSGSHVFQPILTGR ALADRHNAYEINAITGVKPYFTDVLLQTKRNPNTKAQEALESYPLNNAFPGQFFQMPS GQLQPNLPPDLRAPVVFVLVPLRDLPPMHMGQNPNKPRNIVRHLNMPQMSFQETKDLG RLPTGRSVEIVEITEQFASSKEADEKKKKKGKK" BASE COUNT 843 a 595 c 460 g 767 t ORIGIN 1 agtgttctta gaggtagcca cacctcagca agggctttct aacttggaac agcaaagttc 61 aaatgaacga atagacacaa actgtgaaag agtcctgaac ccattacaag gtgaatcttt 121 acagcacaat tgccttctga agctacttga aacagggcat gggacttaaa ggagaaaaaa 181 aaggaaatgg accatctctt ctaacacctg gaatgtgatc caagcctgga gacaaattga 241 tggtttgcag ctagaagaca gtaaatctag caatggagcc catatatgag gagtacctag 301 caaatcatgg aacaatagta aaaccatatt actggctaag cttctctctc gattgctcta 361 attgtcctta ccatattcga acaggtgaag aagcaagagt ttccctcaca gaattttgtc 421 agatttttgg attcccttat gggacaacat ttcctcaaac aaaacacctc acattttatg 481 aactaaaaac ttcttctggt agcctggtgc aaaagggcca tgctagcagt tgcactggga 541 attatatcca tccagaatca atgctctttg aaatgaatgg ttatcttgac tcagccatat 601 acaataatga cagcatcagg catatcattc tgtattccaa caactcccct tgtaatgaag 661 ctaaccactg ctgcatcagc aaaatgtata atttcctgat tacgtatcca ggcatcactc 721 ttagtattta tttttctcag ctctatcata ctgagatgga ctttcctgcc tcagcatgga 781 accgcgaagc tctccggagc ctggccagct tatggccgcg ggttgttttg agtccaataa 841 gtggtgggat ctggcattct gttctccaca gctttataag tggtgtctca ggatcacatg 901 tttttcagcc cattttaact gggagagcac tggctgacag gcacaacgca tatgaaatca 961 atgccataac aggcgtaaaa ccttacttca ctgatgttct tctccagaca aaaaggaatc 1021 caaacacaaa agctcaggag gctttagaga gctacccctt aaacaatgcc tttcctggac 1081 agttttttca aatgccgagt ggacaactcc aacccaacct acctccagac ctcagggctc 1141 ctgttgtttt tgtgctagtg cctctcaggg acttaccacc aatgcatatg ggccaaaacc 1201 caaataaacc caggaatatc gtaaggcact taaatatgcc tcaaatgtca ttccaggaaa 1261 ccaaggacct tggaaggctt cccactggaa ggtcagtgga gatagtggaa atcacagaac 1321 agtttgcaag tagcaaggag gcagatgaaa agaagaagaa gaaagggaag aaataaaatc 1381 tacattccta cagcatgaaa ccaattacca agggacttat tagataggca ataaaaatct 1441 ggaaactttc tctctcaggg ctgagccaag atggagataa actgatgcac taaaagcaaa 1501 ccttgaatta tttaccatat caactattat aaagttacac tattttaaac ataatccaaa 1561 atgtttccat aagcaacttg atctctctcc tttattttga aagtggcagt atcaaaatgg 1621 aaccattagc agcttgctaa tattttgatg cagaaaagga atctcattat tctattttac 1681 tcacatcatc tttccactac aaaagcccat ggacaaaata gctacctaaa tttgtttcgg 1741 taaaaaattt actgtaaaat tgaaaaacag cctgaagcta ctgacattaa gtgctgtttg 1801 caggagcaaa ccagtgattt tctattaatt gttaatcatg gacagaagat tttaggcagc 1861 tcattttttt ctaaagtgat tcaaaatagt tttgtgtggg aaaaagctct tctgctgatt 1921 acatatagct ataaagatta aaacctagcc acctgctcag tttgatcttc cccagctcag 1981 acctctccct tctgagcaga tgatagaggt aagatgatac atgagaacct ccaatggctc 2041 ctgtcatcac atactgtata aaatccaagt tcctcttact ggctttcaag gatcctcctt 2101 taacttcctg ttgccttgtc tcatcagcaa gatcataagt acctacaggt caagcactgt 2161 ctctcccttc tctttagctt ttcccttagg atctagcaca ttacccagca aaatgtgagt 2221 agcaaggctg aaatgacatc tcaataactt caccaatgat tgtaactcag catcccttct 2281 ccatcccagc tgaaagcctg cttcaccatc ctgcaagaga tgttttttct ttttgttagc 2341 atccattccc ctttctaatg cagctcccaa tgcataatgt gtgttttact tccctctttc 2401 tgactccatc ctcgtcacca gtgaatattt gtaccttctc ttaaaatctt caaaacacac 2461 ttctaggaag tgctccttga ttaatcctct aagcacttaa atgaaagcac tttgcttatg 2521 cttatttcac atttgctgcc acttgcctct ttgaaatatg taaagataca ttacaagaaa 2581 aatgtacatt ttctcgtaac ttgctattaa tttttttctt tatatatata tataaagtaa 2641 tcctaagcca aaaaaaaaaa aaaaa //