LOCUS       BC020792                1518 bp    mRNA    linear   HUM 02-DEC-2006
DEFINITION  Homo sapiens homogentisate 1,2-dioxygenase (homogentisate oxidase),
            mRNA (cDNA clone MGC:23690 IMAGE:4716316), complete cds.
ACCESSION   BC020792
VERSION     BC020792.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1518)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JAN-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: CLONTECH
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 37 Row: d Column: 8
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 4504380.
FEATURES             Location/Qualifiers
     source          1..1518
                     /db_xref="H-InvDB:HIT000038963_03"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:23690 IMAGE:4716316"
                     /tissue_type="Liver"
                     /clone_lib="NIH_MGC_76"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..1518
                     /gene="HGD"
                     /gene_synonym="HGO"
                     /db_xref="GeneID:3081"
                     /db_xref="HGNC:HGNC:4892"
                     /db_xref="MIM:607474"
     CDS             167..1156
                     /gene="HGD"
                     /gene_synonym="HGO"
                     /codon_start=1
                     /product="homogentisate 1,2-dioxygenase (homogentisate
                     oxidase)"
                     /protein_id="AAH20792.1"
                     /db_xref="GeneID:3081"
                     /db_xref="HGNC:HGNC:4892"
                     /db_xref="MIM:607474"
                     /translation="MAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQL
                     SGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDEGHVTHNWDEVDPDPNQLRWKPFEI
                     PKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQK
                     GNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYILEVYGVHFELPDLGPIGA
                     NGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYK
                     YNLKNFMVINSVAFDHADPSIFTVLTALRRPARSSWHLRGLPMAPWHLCLNHL"
BASE COUNT          432 a          328 c          358 g          400 t
ORIGIN      
        1 agacaattct ttcagctagt ttgagtgacg cactgaccag tgaagcgcag tgaagcagtg
       61 ggaaccggaa tatccaaaga gtggtttgaa ggagaaagaa gcattgtggc tttatatcct
      121 ctgggcctgg gtttcctgaa gtcaccacac atagaggaga gagaaaatgg ctgagttaaa
      181 gtacatttct ggatttggga atgagtgttc ttcagaggat cctcgctgcc caggttccct
      241 gccagaagga cagaataatc ctcaggtctg cccctacaat ctctatgctg agcagctctc
      301 aggatcggct ttcacttgtc cacggagcac caataagaga agctggctgt ataggattct
      361 accttcagtt tctcacaagc cctttgaatc cattgacgaa ggccatgtca ctcacaactg
      421 ggatgaagtt gatcctgatc ctaaccagct tagatggaaa ccatttgaga ttccaaaagc
      481 atctcagaag aaagtagact ttgtgagtgg cctgcatacc ttgtgtggag ctggagacat
      541 aaagtctaac aatgggcttg ctatccacat tttcctctgc aatacctcca tggagaacag
      601 atgcttttac aattcagatg gggacttctt gattgttccg cagaaaggga accttctcat
      661 ttacaccgag tttggcaaga tgcttgtaca gcccaatgag atctgcgtca ttcagagagg
      721 aatgcggttc agcatagatg tctttgagga gaccaggggc tacatcttgg aggtctatgg
      781 tgtccacttt gagttacctg accttggacc aattggggcc aatggcttgg ccaatcctcg
      841 tgatttcttg atacccattg cctggtatga ggatcgccaa gtaccaggtg gttacacggt
      901 cattaataaa taccagggca agctgtttgc tgccaaacag gatgtctccc cgttcaatgt
      961 tgtggcctgg cacgggaatt atacacccta caagtacaac ctgaagaatt tcatggttat
     1021 caactcagtg gcctttgacc atgcagaccc atccattttc acagtattga ctgctttgag
     1081 aaggccagca aggtcaagct ggcacctgag aggattgccg atggcaccat ggcatttatg
     1141 tttgaatcat ctttaagtct ggcggtcaca aagtggggac tcaaggcctc caggtgtttg
     1201 gatgagaact accacaagtg ctgggagcca ctcaagagcc acttcactcc caactccagg
     1261 aacccagcag aacctaattg agactggaac attgctacca taattaagag tagatttgtg
     1321 aagatttctt cagaatctca tgctttctgg tagtattgga ggagggggtt ggttaaaatg
     1381 aaaattcact tttcatagtc aagtaactca gaacttttat ggaaacgcat ttgcaaagtt
     1441 ctatggctgt caccttaatt actcaataaa cttgctggtg ttctgtgcaa aaaaaaaaaa
     1501 aaaaaaaaaa aaaaaaaa
//