LOCUS BC020792 1518 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens homogentisate 1,2-dioxygenase (homogentisate oxidase), mRNA (cDNA clone MGC:23690 IMAGE:4716316), complete cds. ACCESSION BC020792 VERSION BC020792.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1518) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1518) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 37 Row: d Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4504380. FEATURES Location/Qualifiers source 1..1518 /db_xref="H-InvDB:HIT000038963_03" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23690 IMAGE:4716316" /tissue_type="Liver" /clone_lib="NIH_MGC_76" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1518 /gene="HGD" /gene_synonym="HGO" /db_xref="GeneID:3081" /db_xref="HGNC:HGNC:4892" /db_xref="MIM:607474" CDS 167..1156 /gene="HGD" /gene_synonym="HGO" /codon_start=1 /product="homogentisate 1,2-dioxygenase (homogentisate oxidase)" /protein_id="AAH20792.1" /db_xref="GeneID:3081" /db_xref="HGNC:HGNC:4892" /db_xref="MIM:607474" /translation="MAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQL SGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDEGHVTHNWDEVDPDPNQLRWKPFEI PKASQKKVDFVSGLHTLCGAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQK GNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYILEVYGVHFELPDLGPIGA NGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYK YNLKNFMVINSVAFDHADPSIFTVLTALRRPARSSWHLRGLPMAPWHLCLNHL" BASE COUNT 432 a 328 c 358 g 400 t ORIGIN 1 agacaattct ttcagctagt ttgagtgacg cactgaccag tgaagcgcag tgaagcagtg 61 ggaaccggaa tatccaaaga gtggtttgaa ggagaaagaa gcattgtggc tttatatcct 121 ctgggcctgg gtttcctgaa gtcaccacac atagaggaga gagaaaatgg ctgagttaaa 181 gtacatttct ggatttggga atgagtgttc ttcagaggat cctcgctgcc caggttccct 241 gccagaagga cagaataatc ctcaggtctg cccctacaat ctctatgctg agcagctctc 301 aggatcggct ttcacttgtc cacggagcac caataagaga agctggctgt ataggattct 361 accttcagtt tctcacaagc cctttgaatc cattgacgaa ggccatgtca ctcacaactg 421 ggatgaagtt gatcctgatc ctaaccagct tagatggaaa ccatttgaga ttccaaaagc 481 atctcagaag aaagtagact ttgtgagtgg cctgcatacc ttgtgtggag ctggagacat 541 aaagtctaac aatgggcttg ctatccacat tttcctctgc aatacctcca tggagaacag 601 atgcttttac aattcagatg gggacttctt gattgttccg cagaaaggga accttctcat 661 ttacaccgag tttggcaaga tgcttgtaca gcccaatgag atctgcgtca ttcagagagg 721 aatgcggttc agcatagatg tctttgagga gaccaggggc tacatcttgg aggtctatgg 781 tgtccacttt gagttacctg accttggacc aattggggcc aatggcttgg ccaatcctcg 841 tgatttcttg atacccattg cctggtatga ggatcgccaa gtaccaggtg gttacacggt 901 cattaataaa taccagggca agctgtttgc tgccaaacag gatgtctccc cgttcaatgt 961 tgtggcctgg cacgggaatt atacacccta caagtacaac ctgaagaatt tcatggttat 1021 caactcagtg gcctttgacc atgcagaccc atccattttc acagtattga ctgctttgag 1081 aaggccagca aggtcaagct ggcacctgag aggattgccg atggcaccat ggcatttatg 1141 tttgaatcat ctttaagtct ggcggtcaca aagtggggac tcaaggcctc caggtgtttg 1201 gatgagaact accacaagtg ctgggagcca ctcaagagcc acttcactcc caactccagg 1261 aacccagcag aacctaattg agactggaac attgctacca taattaagag tagatttgtg 1321 aagatttctt cagaatctca tgctttctgg tagtattgga ggagggggtt ggttaaaatg 1381 aaaattcact tttcatagtc aagtaactca gaacttttat ggaaacgcat ttgcaaagtt 1441 ctatggctgt caccttaatt actcaataaa cttgctggtg ttctgtgcaa aaaaaaaaaa 1501 aaaaaaaaaa aaaaaaaa //