LOCUS BC020612 433 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens hepcidin antimicrobial peptide, mRNA (cDNA clone MGC:22220 IMAGE:4715540), complete cds. ACCESSION BC020612 VERSION BC020612.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 433) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 433) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 37 Row: d Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50541944. FEATURES Location/Qualifiers source 1..433 /db_xref="H-InvDB:HIT000038848" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22220 IMAGE:4715540" /tissue_type="Liver" /clone_lib="NIH_MGC_76" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..433 /gene="HAMP" /gene_synonym="HEPC" /gene_synonym="HFE2B" /gene_synonym="LEAP-1" /gene_synonym="LEAP1" /db_xref="GeneID:57817" /db_xref="HGNC:HGNC:15598" /db_xref="MIM:606464" CDS 51..305 /gene="HAMP" /gene_synonym="HEPC" /gene_synonym="HFE2B" /gene_synonym="LEAP-1" /gene_synonym="LEAP1" /codon_start=1 /product="hepcidin antimicrobial peptide" /protein_id="AAH20612.1" /db_xref="GeneID:57817" /db_xref="HGNC:HGNC:15598" /db_xref="MIM:606464" /translation="MALSSQIWAACLLLLLLLASLTSGSVFPQQTGQLAELQPQDRAG ARASWMPMFQRRRRRDTHFPICIFCCGCCHRSKCGMCCKT" BASE COUNT 113 a 133 c 100 g 87 t ORIGIN 1 accagagcaa gctcaagacc cagcagtggg acagccagac agacggcacg atggcactga 61 gctcccagat ctgggccgct tgcctcctgc tcctcctcct cctcgccagc ctgaccagtg 121 gctctgtttt cccacaacag acgggacaac ttgcagagct gcaaccccag gacagagctg 181 gagccagggc cagctggatg cccatgttcc agaggcgaag gaggcgagac acccacttcc 241 ccatctgcat tttctgctgc ggctgctgtc atcgatcaaa gtgtgggatg tgctgcaaga 301 cgtagaacct acctgccctg cccccgtccc ctcccttcct tatttattcc tgctgcccca 361 gaacataggt cttggaataa aatggctggt tcttttgttt tccaaaaaaa aaaaaaaaaa 421 aaaaaaaaaa aaa //