LOCUS BC020264 2911 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens HERPUD family member 2, mRNA (cDNA clone MGC:32126 IMAGE:4878523), complete cds. ACCESSION BC020264 VERSION BC020264.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2911) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2911) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: n Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31377616. FEATURES Location/Qualifiers source 1..2911 /db_xref="H-InvDB:HIT000050737" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:32126 IMAGE:4878523" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2911 /gene="HERPUD2" /gene_synonym="FLJ22313" /db_xref="GeneID:64224" /db_xref="HGNC:HGNC:21915" CDS 617..1837 /gene="HERPUD2" /gene_synonym="FLJ22313" /codon_start=1 /product="HERPUD family member 2" /protein_id="AAH20264.1" /db_xref="GeneID:64224" /db_xref="HGNC:HGNC:21915" /translation="MDQSGMEIPVTLIIKAPNQKYSDQTISCFLNWTVGKLKTHLSNV YPSKPLTKDQRLVYSGRLLPDHLQLKDILRKQDEYHMVHLVCTSRTPPSSPKSSTNRE SHEALTSSSNSSSDHSGSTTPSSGQETLSLAVGSSSEGLRQRTLPQAQTDQAQSHQFP YVMQGNVDNQFPGQAAPPGFPVYPAFSPLQMLWWQQMYAHQYYMQYQAAVSAQATSNV NPTQPTTSQPLNLAHVPGEEPPPAPNLVAQENRPMNENVQMNAQGGPVLNEEDFNRDW LDWMYTFSRAAILLSIVYFYSSFSRFIMVMGAMLLVYLHQAGWFPFRQEGGHQQAPNN NAEVNNDGQNANNLELEEMERLMDDGLEDESGEDGGEDASAIQRPGLMASAWSFITTF FTSLIPEGPPQVAN" BASE COUNT 807 a 708 c 663 g 733 t ORIGIN 1 cgccagcggt ggcgcaacgg ctctcgtccc cgccctcctg ctacctgtag tcgcctgggc 61 cgcccccggc ccagccctgc cttgcgccac cctgcgctgt ccagactgag gggtcaggcg 121 gagagccggg ccgcgccctt cggtcagctt ctctcccttt cacccgcgcc tcctcgcgag 181 acccggggct gggccgtgcc cgtcgccgcg cagcaggaag ggagcggctg ccacggaaaa 241 cgcctggccg gacggtgtgg ctggcggccc tgcctgggcg cggagggcgg cggtggcggg 301 ccccgcggcc ttctctcagc ttcctttctc ctcacgacgg cctccacagt ccggagcccg 361 gcggagcccg gacctggcgg ggagagctgc ctccacggcc gggcacccag accccaccgt 421 cgcagtcgcc accacctcag tccatccttg gtaccggcaa tgggcttcgt atcctccagt 481 gcacttgtaa ctgacttgga cacggaatac taagaactca cttctgtcct catcccagtc 541 gcgccggcgg tgaccatctc ggctcttttg ggcttaactg ccgctcctct ggactctgtc 601 tgactttggg ggcaccatgg accaaagtgg gatggagatt cctgtgaccc tcatcattaa 661 agcaccgaat cagaaataca gtgaccagac tattagctgc ttcttgaact ggaccgtggg 721 gaaactaaaa acgcatctat ctaacgttta ccctagcaaa ccattgacga aggatcagag 781 attggtgtat tcgggcagac tgcttcccga tcatctgcag ctgaaagaca ttctcagaaa 841 acaagatgag tatcatatgg ttcatctagt atgtacttct cggactcctc ccagttctcc 901 aaaatccagc accaatagag aaagtcatga agcattgaca tccagcagca attctagttc 961 agatcattca ggatcaacaa ctccatcatc tggtcaagaa accttgtctt tagctgtggg 1021 ttcttcctca gaaggattga ggcagcgtac ccttccacaa gcacaaactg accaagcaca 1081 gagtcaccag tttccatatg taatgcaagg aaatgtagac aaccaatttc ctgggcaagc 1141 tgctccacct ggattcccag tgtatcccgc gtttagccca ctgcagatgc tatggtggca 1201 acagatgtat gctcatcagt attatatgca gtatcaagct gcagtttcag ctcaggccac 1261 atcaaatgtc aacccaaccc agcctactac ttcacagcct ctaaatttgg cacatgttcc 1321 tggagaagaa cccccaccag ctccaaacct agtggcccaa gaaaatcgac ccatgaatga 1381 gaatgttcaa atgaatgcac agggaggtcc agtactaaat gaagaagact tcaatcgaga 1441 ctggctagac tggatgtaca cgttctcacg agctgcgatt ctccttagca ttgtatactt 1501 ctattcttct tttagtcggt ttatcatggt aatgggagcc atgctactgg tttatttaca 1561 ccaagctgga tggtttcctt ttaggcaaga aggaggtcat cagcaggctc ccaacaataa 1621 tgccgaagtt aacaatgatg ggcaaaatgc aaacaacttg gaacttgaag aaatggagcg 1681 tcttatggat gatgggcttg aagatgagag tggagaagat ggaggtgaag atgccagtgc 1741 aattcaaagg cctggattaa tggcttcagc ttggtctttc atcaccacct tctttacttc 1801 actaatacca gaggggcctc cccaggttgc caattgacct gaaaaactgt gccagctaca 1861 aggagggtct gacttcagga aagtggttta aataacagtg caatttcaaa aaaatttata 1921 actttctttt gatcatcatg tacagaggtg ttttttttct ttaggcttct catgcatatg 1981 aatattttaa gcacgaatgg actactaaat atctgagttt tttttttttt tttttaaaga 2041 tcctaacaga acatagcgta acaatattgg tcttccaggt gttactcatt tcaattatgt 2101 gtagtatacc aggacagacc tattttcatg tcttatttct ttaaagagct gcttcattgg 2161 ccgggcgcca tggctcacgt ctgtaatccc agcactttgg gaggccgagg cgggtgggtt 2221 acttgaggtc aggagttcga gaccagcctg gcaaacatgg cgaaacccca tcttaactaa 2281 aaatacaaaa aaattagccg ggtgtggtgt cacgcgcctg taatcccagc tacttggggg 2341 gctcaggcag gagaattgcc tgaacccagg aggcggaggt tgcagtgagc tgagattggg 2401 ccactgcact ccaccctggg cgacagagtg agactcggtc tcagaaaaaa aaaaaaaaga 2461 gctgcttcac atataaatgt ctatagctag tagcctggcc ctttaatgtt taatttgaat 2521 agatatatct gttttccgtg aattatcttg aaagttttaa acagaatgac ctcatagttt 2581 ttaataaaga atattattta cctaaaatgt gctagtagca tcttgcccag ccataaagca 2641 ataaacttct caataatctt aattttgata tttgaataaa taatggaaac tttctgtatt 2701 aagggcatgt atcccatcaa ttggaatcag taccttaaca gaaaaaggca gctcttcaat 2761 ggaattaacg tgatataaaa tgtttgatat aggcagtact tttataaaaa aagataagct 2821 ggaaattgct ccgtgtaatt ttttaaataa aaagtcaatt atggtaaaaa aaaaaaaaaa 2881 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //