LOCUS BC018786 2061 bp mRNA linear HUM 11-DEC-2001 DEFINITION Homo sapiens, Similar to thrombospondin 3, clone IMAGE:4875844, mRNA, partial cds. ACCESSION BC018786 VERSION BC018786.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2061) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 40 Row: m Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..2061 /db_xref="H-InvDB:HIT000089713" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4875844" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" CDS <1..1779 /codon_start=1 /product="Similar to thrombospondin 3" /protein_id="AAH18786.1" /translation="KQVCNDIDECNDGNNGGCDPNSICTNTVGSFKCGPCRLGFLGNQ SQGCLPARTCHSPAHSPCHIHAHCLFERNGAVSCQCNVGWAGNGNVCGTDTDIDGYPD QALPCMDNNKHCKQDNCLLTPNSGQEDADNDGVGDQCDDDADGDGIKNVEDNCRLFPN KDQQNSDTDSFGDACDNCPNVPNNDQKDTDGNGEGDACDNDVDGDGIPNGLDNCPKVP NPLQTDRDEDGVGDACDSCPEMSNPTQTDADSDLVGDVCDTNEDSDGDGHQDTKDNCP QLPNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDV CEDDFDNDAVVDPLDVCPESAEVTLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIV QTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFLFSYQDSGRFYVVMWKQTEQ TYWQATPFRAVAQPGLQLKAVTSVSGPGEHLRNALWHTGHTPDQVRLLWTDPRNVGWR DKTSYRWQLLHRPQVGYIRVKLYEGPQLVADSGVIIDTSMRGGRLGVFCFSQENIIWS NLQYRCNDTVPEDFEPFRRQLLQGRV" BASE COUNT 529 a 528 c 575 g 429 t ORIGIN 1 aaacaggtct gcaatgacat cgatgaatgc aacgatggca acaatggtgg ctgtgaccca 61 aactccatct gcaccaacac tgtgggctct ttcaagtgtg gtccctgccg cctgggtttc 121 ctgggcaacc agagccaggg ctgcctccca gcccggacct gccacagccc agcccacagc 181 ccctgccaca tccatgctca ctgtctcttt gaacgcaatg gtgcagtgtc ctgccagtgt 241 aacgtgggct gggctgggaa tgggaacgtg tgtgggactg acacagacat cgatggctac 301 ccagaccaag cactgccctg catggacaac aacaaacact gcaaacagga caactgcctt 361 ttgacaccca actctgggca ggaagatgct gataatgatg gtgtggggga ccagtgtgat 421 gatgatgctg atggggatgg gatcaagaat gttgaggaca actgccggct gttccccaac 481 aaagaccagc agaactcaga tacagattca tttggtgatg cctgtgacaa ttgccccaac 541 gttcccaaca atgaccagaa ggacacagat ggcaatgggg aaggagatgc ctgtgacaac 601 gacgtggatg gggatggcat ccccaatgga ttggacaatt gccctaaagt ccccaaccca 661 ctacagacag acagggatga ggacggggtg ggagatgctt gcgacagctg ccctgaaatg 721 agcaatccta cccagacaga tgcagacagc gacctggtgg gggatgtctg tgatactaat 781 gaagacagcg atggggatgg gcatcaggac accaaggaca actgcccaca gctgccaaat 841 agctcccagc tggactctga taacgatgga cttggagatg agtgtgatgg ggatgatgac 901 aatgatggca tcccagatta tgtgcctcct ggtcccgata actgccgcct ggtacccaat 961 cccaatcaga aggactcaga tggcaatggc gttggtgatg tgtgtgagga tgactttgac 1021 aatgatgctg tggtcgaccc cctggatgtg tgtcctgaaa gtgcagaggt aacgcttacg 1081 gattttcggg cctatcagac cgtcgtcctg gatcctgagg gtgatgctca gattgaccca 1141 aactgggttg tgctcaacca gggcatggaa atcgttcaga ccatgaacag tgaccctggc 1201 ttggcagttg gatacacggc cttcaatggt gtggactttg aaggcacctt ccatgtgaac 1261 acagtgactg atgatgacta cgcaggcttt ctcttcagtt atcaagacag tggccgcttc 1321 tacgtagtca tgtggaagca gaccgagcag acctactggc aggctacacc cttccgggcg 1381 gttgcccagc ccgggctgca gctcaaggca gtgacatcag tgtctggccc aggtgagcac 1441 ctccgaaatg ccctgtggca tactggccac acccctgatc aggtacgact gctgtggaca 1501 gacccacgaa atgtgggctg gcgggacaag acctcctatc gctggcagct tctgcaccgg 1561 cctcaagttg gctacattcg ggtgaagctc tatgagggac cccagcttgt ggcggattct 1621 ggggtgatca ttgacacatc catgcgaggg gggcgtcttg gtgtattctg cttctcccaa 1681 gaaaacataa tttggtccaa tctccagtat cgatgcaatg acacagtgcc tgaggacttt 1741 gagccattcc ggaggcagct gctccaggga agggtgtgag gaggaggcca ccagattcag 1801 aattcagaat tttagaccct ttggccttgg ggtccatcct ggagaccctg aggtctaagc 1861 tacagcccct cagccaacca cagacccttc tctggctccc aaaaggagtt cagtcccaga 1921 ggggtggtca ccccaccctt caggggatga gaagttttca aggggtatta ctcaggcact 1981 aaccccagga aagatgacag cacattgcca taaagttttg gttgttttct aaaaaaaaaa 2041 aaaaaaaaaa aaaaaaaaaa a //