LOCUS BC018786 2061 bp mRNA linear HUM 11-DEC-2001
DEFINITION Homo sapiens, Similar to thrombospondin 3, clone IMAGE:4875844,
mRNA, partial cds.
ACCESSION BC018786
VERSION BC018786.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2061)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2061
/db_xref="H-InvDB:HIT000089713"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4875844"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
CDS <1..1779
/codon_start=1
/product="Similar to thrombospondin 3"
/protein_id="AAH18786.1"
/translation="KQVCNDIDECNDGNNGGCDPNSICTNTVGSFKCGPCRLGFLGNQ
SQGCLPARTCHSPAHSPCHIHAHCLFERNGAVSCQCNVGWAGNGNVCGTDTDIDGYPD
QALPCMDNNKHCKQDNCLLTPNSGQEDADNDGVGDQCDDDADGDGIKNVEDNCRLFPN
KDQQNSDTDSFGDACDNCPNVPNNDQKDTDGNGEGDACDNDVDGDGIPNGLDNCPKVP
NPLQTDRDEDGVGDACDSCPEMSNPTQTDADSDLVGDVCDTNEDSDGDGHQDTKDNCP
QLPNSSQLDSDNDGLGDECDGDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDV
CEDDFDNDAVVDPLDVCPESAEVTLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIV
QTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFLFSYQDSGRFYVVMWKQTEQ
TYWQATPFRAVAQPGLQLKAVTSVSGPGEHLRNALWHTGHTPDQVRLLWTDPRNVGWR
DKTSYRWQLLHRPQVGYIRVKLYEGPQLVADSGVIIDTSMRGGRLGVFCFSQENIIWS
NLQYRCNDTVPEDFEPFRRQLLQGRV"
BASE COUNT 529 a 528 c 575 g 429 t
ORIGIN
1 aaacaggtct gcaatgacat cgatgaatgc aacgatggca acaatggtgg ctgtgaccca
61 aactccatct gcaccaacac tgtgggctct ttcaagtgtg gtccctgccg cctgggtttc
121 ctgggcaacc agagccaggg ctgcctccca gcccggacct gccacagccc agcccacagc
181 ccctgccaca tccatgctca ctgtctcttt gaacgcaatg gtgcagtgtc ctgccagtgt
241 aacgtgggct gggctgggaa tgggaacgtg tgtgggactg acacagacat cgatggctac
301 ccagaccaag cactgccctg catggacaac aacaaacact gcaaacagga caactgcctt
361 ttgacaccca actctgggca ggaagatgct gataatgatg gtgtggggga ccagtgtgat
421 gatgatgctg atggggatgg gatcaagaat gttgaggaca actgccggct gttccccaac
481 aaagaccagc agaactcaga tacagattca tttggtgatg cctgtgacaa ttgccccaac
541 gttcccaaca atgaccagaa ggacacagat ggcaatgggg aaggagatgc ctgtgacaac
601 gacgtggatg gggatggcat ccccaatgga ttggacaatt gccctaaagt ccccaaccca
661 ctacagacag acagggatga ggacggggtg ggagatgctt gcgacagctg ccctgaaatg
721 agcaatccta cccagacaga tgcagacagc gacctggtgg gggatgtctg tgatactaat
781 gaagacagcg atggggatgg gcatcaggac accaaggaca actgcccaca gctgccaaat
841 agctcccagc tggactctga taacgatgga cttggagatg agtgtgatgg ggatgatgac
901 aatgatggca tcccagatta tgtgcctcct ggtcccgata actgccgcct ggtacccaat
961 cccaatcaga aggactcaga tggcaatggc gttggtgatg tgtgtgagga tgactttgac
1021 aatgatgctg tggtcgaccc cctggatgtg tgtcctgaaa gtgcagaggt aacgcttacg
1081 gattttcggg cctatcagac cgtcgtcctg gatcctgagg gtgatgctca gattgaccca
1141 aactgggttg tgctcaacca gggcatggaa atcgttcaga ccatgaacag tgaccctggc
1201 ttggcagttg gatacacggc cttcaatggt gtggactttg aaggcacctt ccatgtgaac
1261 acagtgactg atgatgacta cgcaggcttt ctcttcagtt atcaagacag tggccgcttc
1321 tacgtagtca tgtggaagca gaccgagcag acctactggc aggctacacc cttccgggcg
1381 gttgcccagc ccgggctgca gctcaaggca gtgacatcag tgtctggccc aggtgagcac
1441 ctccgaaatg ccctgtggca tactggccac acccctgatc aggtacgact gctgtggaca
1501 gacccacgaa atgtgggctg gcgggacaag acctcctatc gctggcagct tctgcaccgg
1561 cctcaagttg gctacattcg ggtgaagctc tatgagggac cccagcttgt ggcggattct
1621 ggggtgatca ttgacacatc catgcgaggg gggcgtcttg gtgtattctg cttctcccaa
1681 gaaaacataa tttggtccaa tctccagtat cgatgcaatg acacagtgcc tgaggacttt
1741 gagccattcc ggaggcagct gctccaggga agggtgtgag gaggaggcca ccagattcag
1801 aattcagaat tttagaccct ttggccttgg ggtccatcct ggagaccctg aggtctaagc
1861 tacagcccct cagccaacca cagacccttc tctggctccc aaaaggagtt cagtcccaga
1921 ggggtggtca ccccaccctt caggggatga gaagttttca aggggtatta ctcaggcact
1981 aaccccagga aagatgacag cacattgcca taaagttttg gttgttttct aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa a
//