LOCUS BC018205 1752 bp mRNA linear HUM 27-JAN-2006 DEFINITION Homo sapiens hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing, mRNA (cDNA clone MGC:9663 IMAGE:3464710), complete cds. ACCESSION BC018205 VERSION BC018205.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1752) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1752) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: b Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27734733. FEATURES Location/Qualifiers source 1..1752 /db_xref="H-InvDB:HIT000050702" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9663 IMAGE:3464710" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1752 /gene="HEXDC" /gene_synonym="FLJ23825" /db_xref="GeneID:284004" /db_xref="HGNC:HGNC:26307" /db_xref="IMGT/GENE-DB:26307" /db_xref="MIM:26307" CDS 288..1472 /gene="HEXDC" /gene_synonym="FLJ23825" /codon_start=1 /product="HEXDC protein" /protein_id="AAH18205.2" /db_xref="GeneID:284004" /db_xref="HGNC:HGNC:26307" /db_xref="IMGT/GENE-DB:26307" /db_xref="MIM:26307" /translation="MEFVLKHTAFAHLREVGSFPCTLNPHEAESLALVGAMIDQVLEL HPGAQRLHIGCDEVYYLGEGEASRRWLQQEQNSTGKLCLSHMRAVASGVKARRPSVTP LVWDDMLRDLPEDQLAASGVPQLVEPVLWDYTADLDVHGKVLLMQKYRRCGFPQLWAA SAFKGATGPSQAVPPVEHHLRNHVQWLQVAGSGPTDSLQGIILTGWQRYDHYSVLCEL LPAGVPSLAACLQLLLRGGFDEDVKAKVENLLGISSLEKTDPVREGAGSFPGSNILAL VTQVSLHLRSSVDALLEGNRYVTGWFSPYHRQRKLIHPVMVQHIQPAALSLLAQWSTL VQELEAALQLAFYPDAVEEWLEENVHPSLQRLQALLQDLSEVSAPPLPPTSPGRDVAQ DP" BASE COUNT 355 a 527 c 546 g 324 t ORIGIN 1 gaaatattga aatgtcaggt tccacgccat ttcagatgag attagttcat ttagacctta 61 aaggagctcc accaaaggtc tcgtacctct cagagatttt tcctctgttc cgtgcgctag 121 gtgcaaacgg cctcctcatt gagtatgaag acatgtttcc ctacgagggc cctctgaggc 181 tgctgagggc caagtacgcc tacagcccct ctgaaatcaa agagatcttg catctggctg 241 gactcaatga gctggaggtg attcccttgg tgcagacatt tggacacatg gagtttgtgc 301 tgaagcacac ggccttcgcc cacctgcggg aggtgggctc cttcccctgc accctgaacc 361 cccacgaggc agagtccctg gcgctggtgg gcgccatgat tgaccaggtc ctggagctac 421 acccaggcgc ccagcggctg cacatcgggt gtgatgaggt ctattacctc ggagaggggg 481 aggcctcgcg ccggtggcta cagcaagagc agaacagcac ggggaagttg tgcctgtcac 541 acatgcgggc ggtggccagc ggcgtgaagg cccggcgccc cagcgtgaca cccctggtgt 601 gggacgacat gctccgagac ctgcctgagg accagctcgc agcgtccggg gtgccgcagc 661 tggtggagcc ggtgctctgg gactacacgg ccgacctgga tgtgcacggc aaggtcctcc 721 tcatgcagaa gtaccggcgg tgcggctttc cgcagctgtg ggcagccagt gccttcaagg 781 gtgccacggg gcccagccag gccgtgcccc ctgttgagca ccacctcagg aaccacgtgc 841 agtggctgca ggtggcgggc agcgggccca cggactcact gcagggcatc atcctgaccg 901 gctggcagag gtacgaccac tactctgtgc tgtgcgagct gctgcccgca ggagtcccgt 961 ccctggccgc ctgcctgcag ttgcttctac gcggaggatt tgatgaagat gttaaagcga 1021 aagtggagaa ccttctcggg atttccagcc tggaaaaaac ggaccctgtt agggaggggg 1081 ccggctcctt ccctggcagc aacatccttg cccttgtcac acaagtcagc ctccatctgc 1141 gcagctctgt ggatgcgctg ctggagggca acaggtatgt cactggctgg ttcagcccct 1201 accaccgcca gcggaagctc atccacccgg tcatggttca gcacatccag cccgcagcgc 1261 tcagcctcct ggcacagtgg agcaccctcg tgcaggagct ggaggctgcc ctgcagctgg 1321 ctttctaccc ggatgccgtg gaggagtggc tggaggaaaa cgtgcacccc agcctgcagc 1381 ggctgcaagc tctgctgcag gacctcagcg aggtgtctgc ccccccgctg ccacccacca 1441 gccctggcag ggacgttgct caggacccct gaggggagag ctcatgccag ggggctcctg 1501 ctggaggctg ggggggctct gcactgccaa atggcctggg caatacgggc ccacgtgggc 1561 gtcgtgccct ctggcccagc agtgtcttgc ccacactcag ttcctgaggg ccctgggcag 1621 cccctggggg agagactaga aaacacagaa ggaagcagca cagggagacc cgctttgtga 1681 tctgcatgtg tgacactgat tctttggaaa taaagagtgg aagctgcaaa aaaaaaaaaa 1741 aaaaaaaaaa aa //