LOCUS BC017256 2952 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens GLI-Kruppel family member HKR1, mRNA (cDNA clone MGC:29642 IMAGE:3356680), complete cds. ACCESSION BC017256 VERSION BC017256.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2952) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2952) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC017256.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 39 Row: a Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34330189. FEATURES Location/Qualifiers source 1..2952 /db_xref="H-InvDB:HIT000050677" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29642 IMAGE:3356680" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2952 /gene="HKR1" /db_xref="GeneID:284459" /db_xref="HGNC:HGNC:4928" /db_xref="MIM:165250" CDS 270..2249 /gene="HKR1" /codon_start=1 /product="GLI-Kruppel family member HKR1" /protein_id="AAH17256.1" /db_xref="GeneID:284459" /db_xref="HGNC:HGNC:4928" /db_xref="MIM:165250" /translation="MRVNHTVSTMLPTCMVHRQTMSCSGAGGITAFVAFRDVAVYFTQ EEWRLLSPAQRTLHREVMLETYNHLVSLEIPSSKPKLIAQLERGEAPWREERKCPLDL CPESKPEIQLSPSCPLIFSSQQALSQHVWLSHLSQLFSSLWAGNPLHLGKHYPEDQKQ QQDPFCFSGKAEWIQEGEDSRLLFGRVSKNGTSKALSSPPEEQQPAQSKEDNTVVDIG SSPERRADLEETDKVLHGLEVSGFGEIKYEEFGPGFIKESNLLSLQKTQTGETPYMYT EWGDSFGSMSVLIKNPRTHSGGKPYVCRECGRGFTWKSNLITHQRTHSGEKPYVCKDC GRGFTWKSNLFTHQRTHSGLKPYVCKECGQSFSLKSNLITHQRAHTGEKPYVCRECGR GFRQHSHLVRHKRTHSGEKPYICRECEQGFSQKSHLIRHLRTHTGEKPYVCTECGRHF SWKSNLKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQRSHTGEKPFVCTECGRGFTR KSTLSTHQRTHSGEKPFVCAECGRGFNDKSTLISHQRTHSGEKPFMCRECGRRFRQKP NLFRHKRAHSGAFVCRECGQGFCAKLTLIKHQRAHAGGKPHVCRECGQGFSRQSHLIR HQRTHSGEKPYICRKCGRGFSRKSNLIRHQRTHSG" BASE COUNT 814 a 708 c 759 g 671 t ORIGIN 1 gctggttggg acccgggaag gcctccctct taaggtcttt cccacacctc tgcaccttgt 61 tacctgactt tcggcttcag gatccgcagc gtgcacccgc gttccatctg tcttctgaga 121 ctttgccctt ctccaggaag agcactcagg agaccaggaa aatggccaca gggctcctga 181 gagccaaaaa agagctggca agcagatgaa ttaactcccc caagcttcta gctgtgtttc 241 tactcagtgg gagagatttg gagtgaatca tgagggtcaa ccacacagtg tctacaatgc 301 tccctacatg catggttcac agacaaacca tgagttgttc cggggctgga ggaataacgg 361 cgttcgtggc attcagggat gtggctgtgt acttcaccca ggaggagtgg aggttgttga 421 gccctgctca gaggaccctg cacagggagg tgatgctgga gacttataac catctggtct 481 cactggaaat tccatcttct aaaccaaaac tcattgctca gctggagcga ggggaagcgc 541 cctggagaga ggagagaaaa tgtccactgg acctctgtcc agaatcgaag ccagaaattc 601 aacttagtcc ctcctgccct ctgattttct ccagtcagca agctctcagc caacatgtgt 661 ggctgagtca tctctctcag ctgttttcaa gtttatgggc aggaaatcct ctccacctgg 721 gaaaacacta tccagaagat cagaaacaac agcaggatcc attctgcttt agtggcaaag 781 cagaatggat tcaagaggga gaagactcca gactcctgtt tgggagagta agcaaaaatg 841 gcacttcaaa ggcactttcc agcccacctg aagaacaaca gccagcacag tccaaggaag 901 acaacacagt ggtggatata gggtccagcc ctgaacggag ggcagatcta gaggaaacag 961 acaaagtatt gcatggttta gaagtctcag gatttggaga aatcaaatat gaagagtttg 1021 ggccaggctt tatcaaggag tcaaacctcc ttagcctcca gaagacacaa actggggaga 1081 caccttacat gtacactgag tggggagaca gctttggcag tatgtcagtc ctcatcaaaa 1141 acccaaggac acactctggg ggaaagcctt atgtgtgcag ggaatgtggg cgaggcttta 1201 cgtggaagtc aaacctgatc acacatcaga ggacacactc aggggagaaa ccttatgtgt 1261 gcaaggattg tggacgaggc tttacttgga agtcgaacct ctttacacat cagcggacac 1321 actcagggct caagccttat gtgtgcaagg aatgtgggca gagctttagc ctgaagtcaa 1381 acctcattac ccaccagagg gcgcacactg gggagaagcc ttatgtttgc agggaatgtg 1441 ggcgtggctt tcgccagcat tcacacctgg tcagacacaa gaggacacat tcaggagaga 1501 agccttacat ttgcagggag tgtgagcaag gctttagcca gaagtcacac ctcatcagac 1561 acttaaggac acacacagga gagaagcctt atgtatgcac agaatgtggg cgtcacttta 1621 gctggaaatc aaacctcaaa acacaccaga ggacacactc aggggttaaa ccttatgtct 1681 gcctggagtg cgggcagtgc tttagcctga agtcaaacct taacaaacac cagaggtcac 1741 acacggggga gaagccattt gtatgtacgg agtgtgggcg aggctttacc cggaaatcaa 1801 ccctgagcac gcaccagagg acacactcag gggagaagcc atttgtatgt gctgagtgtg 1861 gacgaggctt taatgataag tccaccctca tttcacacca gaggacacat tcaggggaaa 1921 agccttttat gtgcagggag tgtggcagaa ggtttcggca gaagcctaac ctgtttaggc 1981 acaagagggc acactcaggt gcctttgtgt gcagggagtg tgggcaaggc ttttgtgcta 2041 agttaactct cattaaacac cagagagcac acgcaggggg gaagcctcat gtgtgcaggg 2101 agtgtgggca aggctttagc cggcagtcac acctcattag acaccagagg acacattcag 2161 gagagaagcc ttatatttgc agaaagtgtg gacggggctt tagtcggaag tccaacctta 2221 tcagacatca gaggacacac tcaggataga aactttatgt gtatagggaa tgtggtacag 2281 cctttagcca ggagtcatac ttcatcagac accagaggac acacacagtg ctgtggcttt 2341 ttcagccatt gctagatacc aaagtggaga cattctgtgt gtgattatgc atgagactgt 2401 actggtaaga cttgtatctc catccacctg aaggagaatt gctggctcat tttcaggagc 2461 cctgcccttc ctcactgtgg atggtgggtt gtggaaaccc ggtcaggtaa tgatagtggc 2521 aggaggcagt caaatgccca ggcagatagg ggtgggtacc tggtgaaacc caaccttaaa 2581 gctgaagaca gtcccggcta aatcctcata ctgaattgag aacctgtctt cccatttggt 2641 gtgctttcct ccgattgatc ccaacccttc acctatttta cgtatacctg ccctttccta 2701 attggttttt acactgctgt gcccaccttt tgagtggtgc ctttgcatac ttacaaatca 2761 gtcaacgtgt attcccctat tctgagccca taaaagaccc agactcagct gcagtgagga 2821 gagaaatcac cctgctgtgg gggttgggga ccactccctg catcccctct ccactgagag 2881 ctgttctttt gctcaataaa attcttttct acccatcctc acccttcaaa aaaaaaaaaa 2941 aaaaaaaaaa aa //